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Jonathan Badger
Jonathan Badger
Staff Scientist, National Cancer Institute
Verified email at nih.gov - Homepage
Title
Cited by
Cited by
Year
Structure, function and diversity of the healthy human microbiome
Human Microbiome Project Consortium
Nature 486 (7402), 207-14, 2012
94212012
A framework for human microbiome research
Human Microbiome Consortium
Nature. E-pub ahead of print. doi 10, 2012
2217*2012
The Phaeodactylum genome reveals the evolutionary history of diatom genomes
C Bowler, AE Allen, JH Badger, J Grimwood, K Jabbari, A Kuo, ...
Nature 456 (7219), 239-244, 2008
18002008
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus
HP Klenk, RA Clayton, JF Tomb, O White, KE Nelson, KA Ketchum, ...
Nature 390 (6658), 364-370, 1997
17101997
Comparative genomics of trypanosomatid parasitic protozoa
NM El-Sayed, PJ Myler, G Blandin, M Berriman, J Crabtree, G Aggarwal, ...
Science 309 (5733), 404-409, 2005
9762005
Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils
NL Ward, JF Challacombe, PH Janssen, B Henrissat, PM Coutinho, M Wu, ...
Applied and environmental microbiology 75 (7), 2046-2056, 2009
9382009
The Ectocarpus genome and the independent evolution of multicellularity in brown algae
JM Cock, L Sterck, P Rouzé, D Scornet, AE Allen, G Amoutzias, ...
Nature 465 (7298), 617-621, 2010
9362010
Macronuclear Genome Sequence of the Ciliate Tetrahymena thermophila, a Model Eukaryote
JA Eisen, RS Coyne, M Wu, D Wu, M Thiagarajan, JR Wortman, ...
PLoS biology 4 (9), e286, 2006
8342006
A catalog of reference genomes from the human microbiome
Human Microbiome Jumpstart Reference Strains Consortium, KE Nelson, ...
Science 328 (5981), 994-999, 2010
8022010
Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas
AZ Worden, JH Lee, T Mock, P Rouzé, MP Simmons, AL Aerts, AE Allen, ...
Science 324 (5924), 268-272, 2009
6992009
An information-based sequence distance and its application to whole mitochondrial genome phylogeny
M Li, JH Badger, X Chen, S Kwong, P Kearney, H Zhang
Bioinformatics 17 (2), 149-154, 2001
6912001
Fecal microbiota transplant overcomes resistance to anti–PD-1 therapy in melanoma patients
D Davar, AK Dzutsev, JA McCulloch, RR Rodrigues, JM Chauvin, ...
Science 371 (6529), 595-602, 2021
6692021
Major Structural Differences and Novel Potential Virulence Mechanisms from the Genomes of Multiple Campylobacter Species
DE Fouts, EF Mongodin, RE Mandrell, WG Miller, DA Rasko, J Ravel, ...
PLoS biology 3 (1), e15, 2005
6622005
Wild mouse gut microbiota promotes host fitness and improves disease resistance
SP Rosshart, BG Vassallo, D Angeletti, DS Hutchinson, AP Morgan, ...
Cell 171 (5), 1015-1028. e13, 2017
6422017
Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus
ND Fedorova, N Khaldi, VS Joardar, R Maiti, P Amedeo, MJ Anderson, ...
PLoS genetics 4 (4), e1000046, 2008
5682008
Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum
MA Van Den Berg, R Albang, K Albermann, JH Badger, JM Daran, ...
Nature biotechnology 26 (10), 1161-1168, 2008
5182008
CRITICA: coding region identification tool invoking comparative analysis.
JH Badger, GJ Olsen
Molecular biology and evolution 16 (4), 512-524, 1999
4911999
The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversity
N Ziemert, S Podell, K Penn, JH Badger, E Allen, PR Jensen
PloS one 7 (3), e34064, 2012
4442012
Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species
PJ Haney, JH Badger, GL Buldak, CI Reich, CR Woese, GJ Olsen
Proceedings of the National Academy of Sciences 96 (7), 3578-3583, 1999
4111999
Laboratory mice born to wild mice have natural microbiota and model human immune responses
SP Rosshart, J Herz, BG Vassallo, A Hunter, MK Wall, JH Badger, ...
Science 365 (6452), eaaw4361, 2019
3632019
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