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Jennifer Beane
Jennifer Beane
Boston University School of Medicine
Verified email at bu.edu
Title
Cited by
Cited by
Year
Effects of cigarette smoke on the human airway epithelial cell transcriptome
A Spira, J Beane, V Shah, G Liu, F Schembri, X Yang, J Palma, JS Brody
Proceedings of the National Academy of Sciences 101 (27), 10143-10148, 2004
7442004
Airway epithelial gene expression in the diagnostic evaluation of smokers with suspect lung cancer
A Spira, JE Beane, V Shah, K Steiling, G Liu, F Schembri, S Gilman, ...
Nature medicine 13 (3), 361-366, 2007
6782007
The human tumor atlas network: charting tumor transitions across space and time at single-cell resolution
O Rozenblatt-Rosen, A Regev, P Oberdoerffer, T Nawy, A Hupalowska, ...
Cell 181 (2), 236-249, 2020
3982020
Reversible and permanent effects of tobacco smoke exposure on airway epithelial gene expression
J Beane, P Sebastiani, G Liu, JS Brody, ME Lenburg, A Spira
Genome biology 8, 1-17, 2007
2722007
Immune evasion before tumour invasion in early lung squamous carcinogenesis
C Mascaux, M Angelova, A Vasaturo, J Beane, K Hijazi, G Anthoine, ...
Nature 571 (7766), 570-575, 2019
2602019
RNAi targeting of West Nile virus in mosquito midguts promotes virus diversification
DE Brackney, JE Beane, GD Ebel
PLoS pathogens 5 (7), e1000502, 2009
2592009
The SERPINE2 gene is associated with chronic obstructive pulmonary disease
DL DeMeo, TJ Mariani, C Lange, S Srisuma, AA Litonjua, JC Celedón, ...
The American Journal of Human Genetics 78 (2), 253-264, 2006
2472006
Gene expression profiling of human lung tissue from smokers with severe emphysema
A Spira, J Beane, V Pinto-Plata, A Kadar, G Liu, V Shah, B Celli, JS Brody
American journal of respiratory cell and molecular biology 31 (6), 601-610, 2004
2162004
Deciphering the genomic, epigenomic, and transcriptomic landscapes of pre-invasive lung cancer lesions
VH Teixeira, CP Pipinikas, A Pennycuick, H Lee-Six, D Chandrasekharan, ...
Nature medicine 25 (3), 517-525, 2019
2102019
Characterizing the impact of smoking and lung cancer on the airway transcriptome using RNA-Seq
J Beane, J Vick, F Schembri, C Anderlind, A Gower, J Campbell, L Luo, ...
Cancer prevention research 4 (6), 803-817, 2011
1902011
A prediction model for lung cancer diagnosis that integrates genomic and clinical features
J Beane, P Sebastiani, TH Whitfield, K Steiling, YM Dumas, ME Lenburg, ...
Cancer Prevention Research 1 (1), 56-64, 2008
1342008
Integrated genomics reveals convergent transcriptomic networks underlying chronic obstructive pulmonary disease and idiopathic pulmonary fibrosis
RL Kusko, JF Brothers, J Tedrow, K Pandit, L Huleihel, C Perdomo, G Liu, ...
American journal of respiratory and critical care medicine 194 (8), 948-960, 2016
1202016
The case for a pre-cancer genome atlas (PCGA)
JD Campbell, SA Mazzilli, ME Reid, SS Dhillon, S Platero, J Beane, ...
Cancer prevention research 9 (2), 119-124, 2016
1082016
A graph-transformer for whole slide image classification
Y Zheng, RH Gindra, EJ Green, EJ Burks, M Betke, JE Beane, ...
IEEE transactions on medical imaging 41 (11), 3003-3015, 2022
972022
Molecular subtyping reveals immune alterations associated with progression of bronchial premalignant lesions
JE Beane, SA Mazzilli, JD Campbell, G Duclos, K Krysan, C Moy, ...
Nature communications 10 (1), 1856, 2019
842019
Characterizing smoking-induced transcriptional heterogeneity in the human bronchial epithelium at single-cell resolution
GE Duclos, VH Teixeira, P Autissier, YB Gesthalter, MA Reinders-Luinge, ...
Science advances 5 (12), eaaw3413, 2019
802019
Experimental evolution of an RNA virus in wild birds: evidence for host-dependent impacts on population structure and competitive fitness
ND Grubaugh, DR Smith, DE Brackney, AM Bosco-Lauth, JR Fauver, ...
PLoS pathogens 11 (5), e1004874, 2015
632015
Genomic approaches to accelerate cancer interception
J Beane, JD Campbell, J Lel, J Vick, A Spira
The lancet oncology 18 (8), e494-e502, 2017
572017
Assessment of microRNA differential expression and detection in multiplexed small RNA sequencing data
JD Campbell, G Liu, L Luo, J Xiao, J Gerrein, B Juan-Guardela, J Tedrow, ...
Rna 21 (2), 164-171, 2015
522015
Detecting the presence and progression of premalignant lung lesions via airway gene expression
J Beane, SA Mazzilli, AM Tassinari, G Liu, X Zhang, H Liu, AD Buncio, ...
Clinical Cancer Research 23 (17), 5091-5100, 2017
442017
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