Barbara Uszczynska-Ratajczak
Barbara Uszczynska-Ratajczak
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GENCODE reference annotation for the human and mouse genomes
A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ...
Nucleic acids research 47 (D1), D766-D773, 2019
Towards a complete map of the human long non-coding RNA transcriptome
B Uszczynska-Ratajczak, J Lagarde, A Frankish, R Guigó, R Johnson
Nature Reviews Genetics 19 (9), 535-548, 2018
Expanded encyclopaedias of DNA elements in the human and mouse genomes
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...
Nature 583 (7818), 699-710, 2020
High-throughput annotation of full-length long noncoding RNAs with capture long-read sequencing
J Lagarde, B Uszczynska-Ratajczak, S Carbonell, S Pérez-Lluch, A Abad, ...
Nature genetics 49 (12), 1731-1740, 2017
Comparison of GENCODE and RefSeq gene annotation and the impact of reference geneset on variant effect prediction
A Frankish, B Uszczynska, GRS Ritchie, JM Gonzalez, D Pervouchine, ...
BMC genomics 16 (8), 1-11, 2015
Extension of human lncRNA transcripts by RACE coupled with long-read high-throughput sequencing (RACE-Seq)
J Lagarde, B Uszczynska-Ratajczak, J Santoyo-Lopez, JM Gonzalez, ...
Nature communications 7 (1), 1-11, 2016
Gene expression profiling of acute myeloid leukemia samples from adult patients with AML-M1 and-M2 through boutique microarrays, real-time PCR and droplet digital PCR
L Handschuh, M Kaźmierczak, MC Milewski, M Góralski, M Łuczak, ...
International journal of oncology 52 (3), 656-678, 2018
Application of click chemistry to the production of DNA microarrays
B Uszczyńska, T Ratajczak, E Frydrych, H Maciejewski, M Figlerowicz, ...
Lab on a Chip 12 (6), 1151-1156, 2012
Perspectives on ENCODE
MP Snyder, TR Gingeras, JE Moore, Z Weng, MB Gerstein, B Ren, ...
Nature 583 (7818), 693-698, 2020
A Frankish, M Diekhans, I Jungreis, J Lagarde, JE Loveland, JM Mudge, ...
Nucleic acids research 49 (D1), D916-D923, 2021
An MLPA‐Based Strategy for Discrete CNV Genotyping: CNV‐mi RNA s as an Example
M Marcinkowska‐Swojak, B Uszczynska, M Figlerowicz, P Kozlowski
Human mutation 34 (5), 763-773, 2013
Mitochondrial stress-dependent regulation of cellular protein synthesis
U Topf, B Uszczynska-Ratajczak, A Chacinska
Journal of cell science 132 (8), jcs226258, 2019
Re-annotation of 191 developmental and epileptic encephalopathy-associated genes unmasks de novo variants in SCN1A
CA Steward, J Roovers, MM Suner, JM Gonzalez, ...
NPJ genomic medicine 4 (1), 1-11, 2019
siRNA-mediated silencing of integrin β3 expression inhibits the metastatic potential of B16 melanoma cells
A Nasulewicz-Goldeman, B Uszczyńska, K Szczaurska-Nowak, J Wietrzyk
Oncology reports 28 (5), 1567-1573, 2012
Nearly all new protein-coding predictions in the CHESS database are not protein-coding
I Jungreis, ML Tress, J Mudge, C Sisu, T Hunt, R Johnson, ...
bioRxiv, 360602, 2018
DNA microarray-based detection and identification of bacterial and viral pathogens of maize
K Krawczyk, B Uszczyńska-Ratajczak, A Majewska, N Borodynko-Filas
Journal of Plant Diseases and Protection 124 (6), 577-583, 2017
Loss of the Mia40a oxidoreductase leads to hepato-pancreatic insufficiency in zebrafish
AM Sokol, B Uszczynska-Ratajczak, MM Collins, M Bazala, U Topf, ...
PLoS genetics 14 (11), e1007743, 2018
Brain transcriptome sequencing of a natural model of Alzheimer's disease
F Altimiras, B Uszczynska-Ratajczak, F Camara, A Vlasova, E Palumbo, ...
Frontiers in aging neuroscience 9, 64, 2017
Analysis of boutique arrays: A universal method for the selection of the optimal data normalization procedure
B Uszczyńska, J Zyprych-Walczak, L Handschuh, A Szabelska, ...
International journal of molecular medicine 32 (3), 668-684, 2013
The abundance of the long intergenic non-coding RNA 01087 differentiates between luminal and triple-negative breast cancers and predicts patient outcome
FDE De Palma, V Del Monaco, JG Pol, M Kremer, V D’Argenio, G Stoll, ...
Pharmacological Research 161, 105249, 2020
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