Dent Earl

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Bridgett vonHoldtAssociate Professor, Princeton UniversityDirección de correo verificada de princeton.edu
David HausslerScientific Director, UC Santa Cruz Genomics Institute, University of California, Santa CruzDirección de correo verificada de soe.ucsc.edu
Benedict PatenAssociate Professor; Associate Director, UC Santa Cruz Genomics Institute, University of CaliforniaDirección de correo verificada de ucsc.edu
Mark DiekhansUniversity of California, Santa Cruz; UC Santa Cruz Genomics InstituteDirección de correo verificada de soe.ucsc.edu
Daniel ZerbinoMosaic TherapeuticsDirección de correo verificada de mosaic-tx.com
Ngan NguyenAtreca Inc.Dirección de correo verificada de atreca.com
Joel ArmstrongUC Santa Cruz Genomics InstituteDirección de correo verificada de ucsc.edu
Christopher SzetoExelixis, Inc.Dirección de correo verificada de exelixis.com
John NovembreProfessor, University of ChicagoDirección de correo verificada de uchicago.edu
Roland KaysNorth Carolina State University and Museum of Natural SciencesDirección de correo verificada de ncsu.edu
John St. JohnMachine Learning Scientist @ RavelDirección de correo verificada de ravel.bio
Jian MaRay and Stephanie Lane Professor of Computational Biology, Carnegie Mellon UniversityDirección de correo verificada de cs.cmu.edu
Adam EwingMater Research Institute, University of QueenslandDirección de correo verificada de mater.uq.edu.au
Alexander KirschelUniversity of CyprusDirección de correo verificada de ucy.ac.cy

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Dent Earl

Staff Software Engineer at Google. Formerly of UCSC, UCLA.

Dirección de correo verificada de soe.ucsc.edu - Página principal

Bioinformatics genomics evolution population genetics data visualization


Título Ordenar por citas Ordenar por año Ordenar por título	Citado por Citado por	Año
STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method DA Earl, BM VonHoldt Conservation genetics resources 4, 359-361, 2012	13007	2012
Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication BM vonHoldt, JP Pollinger, KE Lohmueller, E Han, HG Parker, P Quignon, ... Nature 464 (7290), 898-902, 2010	880	2010
Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM CJ Vaske, SC Benz, JZ Sanborn, D Earl, C Szeto, J Zhu, D Haussler, ... Bioinformatics 26 (12), i237-i245, 2010	864	2010
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... Gigascience 2 (1), 2047-217X-2-10, 2013	792	2013
Assemblathon 1: a competitive assessment of de novo short read assembly methods D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ... Genome research 21 (12), 2224-2241, 2011	631	2011
A genome-wide perspective on the evolutionary history of enigmatic wolf-like canids BM vonHoldt, JP Pollinger, DA Earl, JC Knowles, AR Boyko, H Parker, ... Genome Research 21 (8), 1294-1305, 2011	376*	2011
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ... Science 346 (6215), 1254449, 2014	365	2014
Cactus: Algorithms for genome multiple sequence alignment B Paten, D Earl, N Nguyen, M Diekhans, D Zerbino, D Haussler Genome research 21 (9), 1512-1528, 2011	281	2011
The genealogy and genetic viability of reintroduced Yellowstone grey wolves BM Vonholdt, DR Stahler, DW Smith, DA Earl, JP Pollinger, RK Wayne Molecular ecology 17 (1), 252-274, 2008	239	2008
Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci J Lilue, AG Doran, IT Fiddes, M Abrudan, J Armstrong, R Bennett, ... Nature genetics 50 (11), 1574-1583, 2018	186	2018
HAL: a hierarchical format for storing and analyzing multiple genome alignments G Hickey, B Paten, D Earl, D Zerbino, D Haussler Bioinformatics 29 (10), 1341-1342, 2013	169	2013
Cactus graphs for genome comparisons B Paten, M Diekhans, D Earl, JS John, J Ma, B Suh, D Haussler Journal of Computational Biology 18 (3), 469-481, 2011	133	2011
Alignathon: a competitive assessment of whole-genome alignment methods D Earl, N Nguyen, G Hickey, RS Harris, S Fitzgerald, K Beal, I Seledtsov, ... Genome research 24 (12), 2077-2089, 2014	123	2014
Retrotransposition of gene transcripts leads to structural variation in mammalian genomes AD Ewing, TJ Ballinger, D Earl, ... Genome biology 14, 1-14, 2013	109	2013
Structure harvester v0. 6.1 DA Earl	103	2011
Comparative Annotation Toolkit (CAT)—simultaneous clade and personal genome annotation IT Fiddes, J Armstrong, M Diekhans, S Nachtweide, ZN Kronenberg, ... Genome research 28 (7), 1029-1038, 2018	96	2018
Building a pan-genome reference for a population N Nguyen, G Hickey, DR Zerbino, B Raney, D Earl, J Armstrong, WJ Kent, ... Journal of Computational Biology 22 (5), 387-401, 2015	63	2015
Identification of recent hybridization between gray wolves and domesticated dogs by SNP genotyping BM Vonholdt, JP Pollinger, DA Earl, HG Parker, EA Ostrander, RK Wayne Mammalian Genome 24, 80-88, 2013	61	2013
Structure Harvester: un sitio web y un programa para visualizar la salida de Structure e implementar el método Evanno DA Earl, BM von Holdt Recursos Genéticos de Conservación 4, 359-361, 2012	55	2012
Structure Harvester v0. 3 DA Earl See http://taylor0. biology. ucla. edu/struct_harvest, 2009	47	2009

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