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Dent Earl
Dent Earl
Staff Software Engineer at Google. Formerly of UCSC, UCLA.
Dirección de correo verificada de soe.ucsc.edu - Página principal
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Año
STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method
DA Earl, BM VonHoldt
Conservation genetics resources 4, 359-361, 2012
130362012
Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication
BM vonHoldt, JP Pollinger, KE Lohmueller, E Han, HG Parker, P Quignon, ...
Nature 464 (7290), 898-902, 2010
8822010
Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM
CJ Vaske, SC Benz, JZ Sanborn, D Earl, C Szeto, J Zhu, D Haussler, ...
Bioinformatics 26 (12), i237-i245, 2010
8652010
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ...
Gigascience 2 (1), 2047-217X-2-10, 2013
7932013
Assemblathon 1: a competitive assessment of de novo short read assembly methods
D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ...
Genome research 21 (12), 2224-2241, 2011
6322011
A genome-wide perspective on the evolutionary history of enigmatic wolf-like canids
BM vonHoldt, JP Pollinger, DA Earl, JC Knowles, AR Boyko, H Parker, ...
Genome Research 21 (8), 1294-1305, 2011
376*2011
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs
RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ...
Science 346 (6215), 1254449, 2014
3652014
Cactus: Algorithms for genome multiple sequence alignment
B Paten, D Earl, N Nguyen, M Diekhans, D Zerbino, D Haussler
Genome research 21 (9), 1512-1528, 2011
2812011
The genealogy and genetic viability of reintroduced Yellowstone grey wolves
BM Vonholdt, DR Stahler, DW Smith, DA Earl, JP Pollinger, RK Wayne
Molecular ecology 17 (1), 252-274, 2008
2392008
Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci
J Lilue, AG Doran, IT Fiddes, M Abrudan, J Armstrong, R Bennett, ...
Nature genetics 50 (11), 1574-1583, 2018
1882018
HAL: a hierarchical format for storing and analyzing multiple genome alignments
G Hickey, B Paten, D Earl, D Zerbino, D Haussler
Bioinformatics 29 (10), 1341-1342, 2013
1702013
Cactus graphs for genome comparisons
B Paten, M Diekhans, D Earl, JS John, J Ma, B Suh, D Haussler
Journal of Computational Biology 18 (3), 469-481, 2011
1332011
Alignathon: a competitive assessment of whole-genome alignment methods
D Earl, N Nguyen, G Hickey, RS Harris, S Fitzgerald, K Beal, I Seledtsov, ...
Genome research 24 (12), 2077-2089, 2014
1232014
Retrotransposition of gene transcripts leads to structural variation in mammalian genomes
AD Ewing, TJ Ballinger, D Earl, ...
Genome biology 14, 1-14, 2013
1092013
Structure harvester v0. 6.1
DA Earl
1032011
Comparative Annotation Toolkit (CAT)—simultaneous clade and personal genome annotation
IT Fiddes, J Armstrong, M Diekhans, S Nachtweide, ZN Kronenberg, ...
Genome research 28 (7), 1029-1038, 2018
962018
Building a pan-genome reference for a population
N Nguyen, G Hickey, DR Zerbino, B Raney, D Earl, J Armstrong, WJ Kent, ...
Journal of Computational Biology 22 (5), 387-401, 2015
632015
Identification of recent hybridization between gray wolves and domesticated dogs by SNP genotyping
BM Vonholdt, JP Pollinger, DA Earl, HG Parker, EA Ostrander, RK Wayne
Mammalian Genome 24, 80-88, 2013
612013
Structure Harvester: un sitio web y un programa para visualizar la salida de Structure e implementar el método Evanno
DA Earl, BM von Holdt
Recursos Genéticos de Conservación 4, 359-361, 2012
552012
Structure Harvester v0. 3
DA Earl
See http://taylor0. biology. ucla. edu/struct_harvest, 2009
472009
El sistema no puede realizar la operación en estos momentos. Inténtalo de nuevo más tarde.
Artículos 1–20