Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ... nature 447 (7146), 799-816, 2007 | 5798 | 2007 |
Landscape of transcription in human cells S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ... Nature 489 (7414), 101-108, 2012 | 5025 | 2012 |
The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression T Derrien, R Johnson, G Bussotti, A Tanzer, S Djebali, H Tilgner, ... Genome research 22 (9), 1775-1789, 2012 | 4807 | 2012 |
The transcriptional landscape of the mammalian genome P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, ... science 309 (5740), 1559-1563, 2005 | 3862 | 2005 |
The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells YH Loh, Q Wu, JL Chew, VB Vega, W Zhang, X Chen, G Bourque, ... Nature genetics 38 (4), 431-440, 2006 | 2906 | 2006 |
Integration of external signaling pathways with the core transcriptional network in embryonic stem cells X Chen, H Xu, P Yuan, F Fang, M Huss, VB Vega, E Wong, YL Orlov, ... Cell 133 (6), 1106-1117, 2008 | 2841 | 2008 |
International network of cancer genome projects Data coordination centre Kasprzyk (Leader) Arek 1 Stein (Leader) Lincoln D ... Nature 464 (7291), 993-998, 2010 | 2124 | 2010 |
An oestrogen-receptor-α-bound human chromatin interactome MJ Fullwood, MH Liu, YF Pan, J Liu, H Xu, YB Mohamed, YL Orlov, ... Nature 462 (7269), 58-64, 2009 | 1825 | 2009 |
A global map of p53 transcription-factor binding sites in the human genome CL Wei, Q Wu, VB Vega, KP Chiu, P Ng, T Zhang, A Shahab, HC Yong, ... Cell 124 (1), 207-219, 2006 | 1405 | 2006 |
Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation G Li, X Ruan, RK Auerbach, KS Sandhu, M Zheng, P Wang, HM Poh, ... Cell 148 (1-2), 84-98, 2012 | 1265 | 2012 |
Functional metagenomic profiling of nine biomes EA Dinsdale, RA Edwards, D Hall, F Angly, M Breitbart, JM Brulc, ... Nature 452 (7187), 629-632, 2008 | 1079 | 2008 |
The draft genome of sweet orange (Citrus sinensis) Q Xu, LL Chen, X Ruan, D Chen, A Zhu, C Chen, D Bertrand, WB Jiao, ... Nature genetics 45 (1), 59-66, 2013 | 948 | 2013 |
CTCF-mediated human 3D genome architecture reveals chromatin topology for transcription Z Tang, OJ Luo, X Li, M Zheng, JJ Zhu, P Szalaj, P Trzaskoma, ... Cell 163 (7), 1611-1627, 2015 | 863 | 2015 |
Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells S Schoenfelder, T Sexton, L Chakalova, NF Cope, A Horton, S Andrews, ... Nature genetics 42 (1), 53-61, 2010 | 789 | 2010 |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). DS Gerhard, L Wagner, EA Feingold, CM Shenmen, LH Grouse, ... Genome research 14 (10B), 2121-2127, 2004 | 785 | 2004 |
RNA viral community in human feces: prevalence of plant pathogenic viruses T Zhang, M Breitbart, WH Lee, JQ Run, CL Wei, SWL Soh, ML Hibberd, ... PLoS biology 4 (1), e3, 2006 | 760 | 2006 |
CTCF-mediated functional chromatin interactome in pluripotent cells L Handoko, H Xu, G Li, CY Ngan, E Chew, M Schnapp, CWH Lee, C Ye, ... Nature genetics 43 (7), 630-638, 2011 | 742 | 2011 |
Comparative full-length genome sequence analysis of 14 SARS coronavirus isolates and common mutations associated with putative origins of infection YJ Ruan, CL Wei, AE Ling, VB Vega, H Thoreau, SYS Thoe, JM Chia, ... The Lancet 361 (9371), 1779-1785, 2003 | 700 | 2003 |
Exome sequencing of gastric adenocarcinoma identifies recurrent somatic mutations in cell adhesion and chromatin remodeling genes ZJ Zang, I Cutcutache, SL Poon, SL Zhang, JR McPherson, J Tao, ... Nature genetics 44 (5), 570-574, 2012 | 658 | 2012 |
Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells XD Zhao, X Han, JL Chew, J Liu, KP Chiu, A Choo, YL Orlov, WK Sung, ... Cell stem cell 1 (3), 286-298, 2007 | 635 | 2007 |