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Bobbie-Jo Webb-Robertson
Bobbie-Jo Webb-Robertson
Senior Research Scientist, Pacific Northwest National Laboratory
Dirección de correo verificada de pnnl.gov
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Normalization approaches for removing systematic biases associated with mass spectrometry and label-free proteomics
SJ Callister, RC Barry, JN Adkins, ET Johnson, W Qian, ...
Journal of proteome research 5 (2), 277-286, 2006
3992006
Pathogenic influenza viruses and coronaviruses utilize similar and contrasting approaches to control interferon-stimulated gene responses
VD Menachery, AJ Eisfeld, A Schäfer, L Josset, AC Sims, S Proll, S Fan, ...
MBio 5 (3), e01174-14, 2014
2352014
Mechanisms of severe acute respiratory syndrome coronavirus-induced acute lung injury
LE Gralinski, A Bankhead III, S Jeng, VD Menachery, S Proll, SE Belisle, ...
MBio 4 (4), e00271-13, 2013
2352013
Review, evaluation, and discussion of the challenges of missing value imputation for mass spectrometry-based label-free global proteomics
BJM Webb-Robertson, HK Wiberg, MM Matzke, JN Brown, J Wang, ...
Journal of proteome research 14 (5), 1993-2001, 2015
2292015
Challenges in biomarker discovery: combining expert insights with statistical analysis of complex omics data
JE McDermott, J Wang, H Mitchell, BJ Webb-Robertson, R Hafen, ...
Expert opinion on medical diagnostics 7 (1), 37-51, 2013
2012013
MERS-CoV and H5N1 influenza virus antagonize antigen presentation by altering the epigenetic landscape
VD Menachery, A Schäfer, KE Burnum-Johnson, HD Mitchell, AJ Eisfeld, ...
Proceedings of the National Academy of Sciences 115 (5), E1012-E1021, 2018
1642018
MARRVEL: integration of human and model organism genetic resources to facilitate functional annotation of the human genome
J Wang, R Al-Ouran, Y Hu, SY Kim, YW Wan, MF Wangler, S Yamamoto, ...
The American Journal of Human Genetics 100 (6), 843-853, 2017
1482017
Quantitative proteomics analysis of adsorbed plasma proteins classifies nanoparticles with different surface properties and size
H Zhang, KE Burnum, ML Luna, BO Petritis, JS Kim, WJ Qian, RJ Moore, ...
Proteomics 11 (23), 4569-4577, 2011
1482011
MPLEx: a robust and universal protocol for single-sample integrative proteomic, metabolomic, and lipidomic analyses
ES Nakayasu, CD Nicora, AC Sims, KE Burnum-Johnson, YM Kim, ...
MSystems 1 (3), e00043-16, 2016
1362016
The cancer microbiome: distinguishing direct and indirect effects requires a systemic view
JB Xavier, VB Young, J Skufca, F Ginty, T Testerman, AT Pearson, ...
Trends in cancer 6 (3), 192-204, 2020
1352020
The undiagnosed diseases network: accelerating discovery about health and disease
RB Ramoni, JJ Mulvihill, DR Adams, P Allard, EA Ashley, JA Bernstein, ...
The American Journal of Human Genetics 100 (2), 185-192, 2017
1342017
Release of severe acute respiratory syndrome coronavirus nuclear import block enhances host transcription in human lung cells
AC Sims, SC Tilton, VD Menachery, LE Gralinski, A Schäfer, MM Matzke, ...
Journal of virology 87 (7), 3885-3902, 2013
1272013
Comparative proteomics and pulmonary toxicity of instilled single-walled carbon nanotubes, crocidolite asbestos, and ultrafine carbon black in mice
JG Teeguarden, BJ Webb-Robertson, KM Waters, AR Murray, ER Kisin, ...
Toxicological Sciences 120 (1), 123-135, 2011
1172011
A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics
BJM Webb-Robertson, WR Cannon, CS Oehmen, AR Shah, ...
Bioinformatics 26 (13), 1677-1683, 2010
1092010
A syndromic neurodevelopmental disorder caused by de novo variants in EBF3
HT Chao, M Davids, E Burke, JG Pappas, JA Rosenfeld, AJ McCarty, ...
The American Journal of Human Genetics 100 (1), 128-137, 2017
942017
A comparative analysis of computational approaches to relative protein quantification using peptide peak intensities in label‐free LC‐MS proteomics experiments
MM Matzke, JN Brown, MA Gritsenko, TO Metz, JG Pounds, KD Rodland, ...
Proteomics 13 (3-4), 493-503, 2013
942013
Automated mass spectrometry imaging of over 2000 proteins from tissue sections at 100-μm spatial resolution
PD Piehowski, Y Zhu, LM Bramer, KG Stratton, R Zhao, DJ Orton, ...
Nature communications 11 (1), 8, 2020
922020
The impact of proinflammatory cytokines on the β-cell regulatory landscape provides insights into the genetics of type 1 diabetes
M Ramos-Rodríguez, H Raurell-Vila, ML Colli, MI Alvelos, ...
Nature genetics 51 (11), 1588-1595, 2019
902019
Combined statistical analyses of peptide intensities and peptide occurrences improves identification of significant peptides from MS-based proteomics data
BJM Webb-Robertson, LA McCue, KM Waters, MM Matzke, JM Jacobs, ...
Journal of proteome research 9 (11), 5748-5756, 2010
892010
Improved quality control processing of peptide-centric LC-MS proteomics data
MM Matzke, KM Waters, TO Metz, JM Jacobs, AC Sims, RS Baric, ...
Bioinformatics 27 (20), 2866-2872, 2011
872011
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