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Rodrigo Ochoa
Rodrigo Ochoa
Senior Scientist, Novo Nordisk, Måløv, Denmark
Dirección de correo verificada de novonordisk.com - Página principal
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Año
Drug search for leishmaniasis: a virtual screening approach by grid computing
R Ochoa, SJ Watowich, A Flórez, CV Mesa, SM Robledo, C Muskus
Journal of computer-aided molecular design 30, 541-552, 2016
442016
Predicting the affinity of peptides to major histocompatibility complex class II by scoring molecular dynamics simulations
R Ochoa, A Laio, P Cossio
Journal of Chemical Information and Modeling 59 (8), 3464-3473, 2019
372019
Anti-herpetic, anti-dengue and antineoplastic activities of simple and heterocycle-fused derivatives of terpenyl-1, 4-naphthoquinone and 1, 4-anthraquinone
VC Roa-Linares, Y Miranda-Brand, V Tangarife-Castaño, R Ochoa, ...
Molecules 24 (7), 1279, 2019
342019
myChEMBL: a virtual machine implementation of open data and cheminformatics tools
R Ochoa, M Davies, G Papadatos, F Atkinson, JP Overington
Bioinformatics 30 (2), 298-300, 2014
252014
Repurposing of known drugs for leishmaniasis treatment using bioinformatic predictions, in vitro validations and pharmacokinetic simulations
C Bustamante, R Ochoa, C Asela, C Muskus
Journal of Computer-Aided Molecular Design 33, 845-854, 2019
232019
Assessing the capability of in silico mutation protocols for predicting the finite temperature conformation of amino acids
R Ochoa, MA Soler, A Laio, P Cossio
Physical Chemistry Chemical Physics 20 (40), 25901-25909, 2018
232018
Toxic activity, molecular modeling and docking simulations of Bacillus thuringiensis Cry11 toxin variants obtained via DNA shuffling
AM Florez, MO Suarez-Barrera, GM Morales, KV Rivera, S Orduz, ...
Frontiers in Microbiology 9, 383022, 2018
222018
MyChEMBL: a virtual platform for distributing cheminformatics tools and open data
M Davies, M Nowotka, G Papadatos, F Atkinson, GJP Van Westen, ...
Challenges 5 (2), 334-337, 2014
202014
Perspectives for the structure-based design of acetylcholinesterase reactivators
R Ochoa, CA Rodriguez, AF Zuluaga
Journal of Molecular Graphics and Modelling, 2016
182016
The Akt-like kinase of Leishmania panamensis: As a new molecular target for drug discovery
D Tirado-Duarte, M Marín-Villa, R Ochoa, G Blandón-Fuentes, MJ Soares, ...
Acta tropica 177, 171-178, 2018
162018
Identification of a RAC/AKT-like gene in Leishmania parasites as a putative therapeutic target in leishmaniasis.
VM RE, R Ochoa, CE Muskus, A Muro, F Mollinedo
Parasites & Vectors 10 (1), 458, 2017
16*2017
PARCE: protocol for amino acid refinement through computational evolution
R Ochoa, MA Soler, A Laio, P Cossio
Computer Physics Communications 260, 107716, 2021
152021
Application of ensemble pharmacophore-based virtual screening to the discovery of novel antimitotic tubulin inhibitors
L Gallego-Yerga, R Ochoa, I Lans, C Peña-Varas, M Alegría-Arcos, ...
Computational and Structural Biotechnology Journal 19, 4360-4372, 2021
152021
PepFun: open source protocols for peptide-related computational analysis
R Ochoa, P Cossio
Molecules 26 (6), 1664, 2021
122021
Furanchalcone–biphenyl hybrids: synthesis, in silico studies, antitrypanosomal and cytotoxic activities
E García, R Ochoa, I Vásquez, L Conesa-Milián, M Carda, A Yepes, ...
Medicinal Chemistry Research 28, 608-622, 2019
112019
In silico screening of potential drug with antileishmanial activity and validation of their activity by in vitro and in vivo studies
CV Mesa, GA Blandón, DL Muñoz, CE Muskus, AF Flórez, R Ochoa, ...
J Chem Chem Eng 9, 375-402, 2015
112015
Multiple-allele MHC class II epitope engineering by a molecular dynamics-based evolution protocol
R Ochoa, VAS Lunardelli, DS Rosa, A Laio, P Cossio
Frontiers in Immunology 13, 862851, 2022
102022
dockECR: Open consensus docking and ranking protocol for virtual screening of small molecules
R Ochoa, K Palacio-Rodriguez, CM Clemente, NS Adler
Journal of Molecular Graphics and Modelling 109, 108023, 2021
102021
In silico search of inhibitors of Streptococcus mutans for the control of dental plaque
R Ochoa, MC Martínez-Pabón, MA Arismendi-Echeverri, ...
Archives of oral biology 83, 68-75, 2017
102017
An automated protocol for modelling peptide substrates to proteases
R Ochoa, M Magnitov, RA Laskowski, P Cossio, JM Thornton
BMC bioinformatics 21, 1-20, 2020
82020
El sistema no puede realizar la operación en estos momentos. Inténtalo de nuevo más tarde.
Artículos 1–20