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Daniel Zerbino
Daniel Zerbino
Mosaic Therapeutics
Dirección de correo verificada de mosaic-tx.com - Página principal
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Año
Velvet: algorithms for de novo short read assembly using de Bruijn graphs
DR Zerbino, E Birney
Genome research 18 (5), 821-829, 2008
110652008
Comprehensive molecular characterization of human colon and rectal cancer
Cancer Genome Atlas Network
Nature 487 (7407), 330, 2012
73832012
Ensembl 2012
P Flicek, MR Amode, D Barrell, K Beal, S Brent, D Carvalho-Silva, ...
Nucleic acids research, gkr991, 2011
47362011
Comprehensive genomic characterization of squamous cell lung cancers
Cancer Genome Atlas Research Network
Nature 489 (7417), 519, 2012
36442012
Genetic effects on gene expression across human tissues
GTEx Consortium Lead analysts: Aguet François 1 Brown Andrew A. 2 3 4 Castel ...
Nature 550 (7675), 204-213, 2017
32622017
Ensembl 2018
DR Zerbino, P Achuthan, W Akanni, MR Amode, D Barrell, J Bhai, K Billis, ...
Nucleic acids research 46 (D1), D754-D761, 2018
30282018
GENCODE reference annotation for the human and mouse genomes
A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ...
Nucleic acids research 47 (D1), D766-D773, 2019
25692019
The GTEx Consortium atlas of genetic regulatory effects across human tissues
GTEx Consortium
Science 369 (6509), 1318-1330, 2020
24412020
Ensembl 2020
AD Yates, P Achuthan, W Akanni, J Allen, J Allen, J Alvarez-Jarreta, ...
Nucleic acids research 48 (D1), D682-D688, 2020
17302020
Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels
MH Schulz, DR Zerbino, M Vingron, E Birney
Bioinformatics 28 (8), 1086-1092, 2012
16982012
Ensembl 2015
F Cunningham, MR Amode, D Barrell, K Beal, K Billis, S Brent, ...
Nucleic acids research 43 (D1), D662-D669, 2015
16712015
Ensembl 2016
A Yates, W Akanni, MR Amode, D Barrell, K Billis, D Carvalho-Silva, ...
Nucleic acids research 44 (D1), D710-D716, 2016
16332016
Ensembl 2021
KL Howe, P Achuthan, J Allen, J Allen, J Alvarez-Jarreta, MR Amode, ...
Nucleic acids research 49 (D1), D884-D891, 2021
14562021
Ensembl 2022
F Cunningham, JE Allen, J Allen, J Alvarez-Jarreta, MR Amode, ...
Nucleic acids research 50 (D1), D988-D995, 2022
13282022
Ensembl 2019
F Cunningham, P Achuthan, W Akanni, J Allen, MR Amode, IM Armean, ...
Nucleic acids research 47 (D1), D745-D751, 2019
9762019
Lineage-specific genome architecture links enhancers and non-coding disease variants to target gene promoters
BM Javierre, OS Burren, SP Wilder, R Kreuzhuber, SM Hill, S Sewitz, ...
Cell 167 (5), 1369-1384. e19, 2016
9642016
Assessment of transcript reconstruction methods for RNA-seq
T Steijger, JF Abril, PG Engström, F Kokocinski, TJ Hubbard, R Guigó, ...
Nature methods 10 (12), 1177-1184, 2013
7652013
GENCODE 2021
A Frankish, M Diekhans, I Jungreis, J Lagarde, JE Loveland, JM Mudge, ...
Nucleic acids research 49 (D1), D916-D923, 2021
7172021
Using the Velvet de novo Assembler for Short‐Read Sequencing Technologies
DR Zerbino
Current protocols in bioinformatics 31 (1), 11.5. 1-11.5. 12, 2010
6922010
Assemblathon 1: a competitive assessment of de novo short read assembly methods
D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ...
Genome research 21 (12), 2224-2241, 2011
6322011
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Artículos 1–20