| Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications GK Savova, JJ Masanz, PV Ogren, J Zheng, S Sohn, KC Kipper-Schuler, ... Journal of the American Medical Informatics Association 17 (5), 507-513, 2010 | 2199 | 2010 |
| Clinical information extraction applications: a literature review Y Wang, L Wang, M Rastegar-Mojarad, S Moon, F Shen, N Afzal, S Liu, ... Journal of biomedical informatics 77, 34-49, 2018 | 746 | 2018 |
| A clinical text classification paradigm using weak supervision and deep representation Y Wang, S Sohn, S Liu, F Shen, L Wang, EJ Atkinson, S Amin, H Liu BMC medical informatics and decision making 19, 1-13, 2019 | 196 | 2019 |
| Deep learning and alternative learning strategies for retrospective real-world clinical data D Chen, S Liu, P Kingsbury, S Sohn, CB Storlie, EB Habermann, ... NPJ digital medicine 2 (1), 43, 2019 | 193 | 2019 |
| An information extraction framework for cohort identification using electronic health records H Liu, SJ Bielinski, S Sohn, S Murphy, KB Wagholikar, SR Jonnalagadda, ... AMIA Summits on Translational Science Proceedings 2013, 149, 2013 | 185 | 2013 |
| Normalization and standardization of electronic health records for high-throughput phenotyping: the SHARPn consortium J Pathak, KR Bailey, CE Beebe, S Bethard, DS Carrell, PJ Chen, ... Journal of the American Medical Informatics Association 20 (e2), e341-e348, 2013 | 145 | 2013 |
| Abbreviation definition identification based on automatic precision estimates S Sohn, DC Comeau, W Kim, WJ Wilbur BMC bioinformatics 9, 1-10, 2008 | 141 | 2008 |
| Clinical concept extraction: a methodology review S Fu, D Chen, H He, S Liu, S Moon, KJ Peterson, F Shen, L Wang, ... Journal of biomedical informatics 109, 103526, 2020 | 137 | 2020 |
| DEEPEN: A negation detection system for clinical text incorporating dependency relation into NegEx S Mehrabi, A Krishnan, S Sohn, AM Roch, H Schmidt, J Kesterson, ... Journal of biomedical informatics 54, 213-219, 2015 | 132 | 2015 |
| MedXN: an open source medication extraction and normalization tool for clinical text S Sohn, C Clark, SR Halgrim, SP Murphy, CG Chute, H Liu Journal of the American Medical Informatics Association 21 (5), 858-865, 2014 | 122 | 2014 |
| Drug side effect extraction from clinical narratives of psychiatry and psychology patients S Sohn, JPA Kocher, CG Chute, GK Savova Journal of the American Medical Informatics Association 18 (Supplement_1 …, 2011 | 120 | 2011 |
| Mining peripheral arterial disease cases from narrative clinical notes using natural language processing N Afzal, S Sohn, S Abram, CG Scott, R Chaudhry, H Liu, IJ Kullo, ... Journal of vascular surgery 65 (6), 1753-1761, 2017 | 99 | 2017 |
| Natural language processing of clinical notes for identification of critical limb ischemia N Afzal, VP Mallipeddi, S Sohn, H Liu, R Chaudhry, CG Scott, IJ Kullo, ... International journal of medical informatics 111, 83-89, 2018 | 96 | 2018 |
| Desiderata for delivering NLP to accelerate healthcare AI advancement and a Mayo Clinic NLP-as-a-service implementation A Wen, S Fu, S Moon, M El Wazir, A Rosenbaum, VC Kaggal, S Liu, ... NPJ digital medicine 2 (1), 130, 2019 | 86 | 2019 |
| Toward a learning health-care system–knowledge delivery at the point of care empowered by big data and NLP VC Kaggal, RK Elayavilli, S Mehrabi, JJ Pankratz, S Sohn, Y Wang, D Li, ... Biomedical informatics insights 8, BII. S37977, 2016 | 79 | 2016 |
| Automated chart review for asthma cohort identification using natural language processing: an exploratory study ST Wu, S Sohn, KE Ravikumar, K Wagholikar, SR Jonnalagadda, H Liu, ... Annals of Allergy, Asthma & Immunology 111 (5), 364-369, 2013 | 77 | 2013 |
| Mayo clinic smoking status classification system: extensions and improvements S Sohn, GK Savova AMIA Annual Symposium Proceedings 2009, 619, 2009 | 77 | 2009 |
| Clinical documentation variations and NLP system portability: a case study in asthma birth cohorts across institutions S Sohn, Y Wang, CI Wi, EA Krusemark, E Ryu, MH Ali, YJ Juhn, H Liu Journal of the American Medical Informatics Association 25 (3), 353-359, 2018 | 76 | 2018 |
| Dependency parser-based negation detection in clinical narratives S Sohn, S Wu, CG Chute AMIA Summits on Translational Science Proceedings 2012, 1, 2012 | 75 | 2012 |
| Application of a natural language processing algorithm to asthma ascertainment. An automated chart review CI Wi, S Sohn, MC Rolfes, A Seabright, E Ryu, G Voge, KA Bachman, ... American journal of respiratory and critical care medicine 196 (4), 430-437, 2017 | 73 | 2017 |
