Xie Mingchao
Xie Mingchao
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Integrative analysis of 111 reference human epigenomes
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317-330, 2015
Mutational landscape and significance across 12 major cancer types
C Kandoth, MD McLellan, F Vandin, K Ye, B Niu, C Lu, M Xie, Q Zhang, ...
Nature 502 (7471), 333-339, 2013
Age-related mutations associated with clonal hematopoietic expansion and malignancies
M Xie, C Lu, J Wang, MD McLellan, KJ Johnson, MC Wendl, ...
Nature medicine 20 (12), 1472-1478, 2014
MSIsensor: microsatellite instability detection using paired tumor-normal sequence data
B Niu, K Ye, Q Zhang, C Lu, M Xie, MD McLellan, MC Wendl, L Ding
Bioinformatics 30 (7), 1015-1016, 2013
The human epigenome browser at Washington University
X Zhou, B Maricque, M Xie, D Li, V Sundaram, EA Martin, BC Koebbe, ...
Nature methods 8 (12), 989-990, 2011
Integrated analysis of germline and somatic variants in ovarian cancer
KL Kanchi, KJ Johnson, C Lu, MD McLellan, MDM Leiserson, MC Wendl, ...
Nature communications 5 (1), 1-14, 2014
Patterns and functional implications of rare germline variants across 12 cancer types
C Lu, M Xie, MC Wendl, J Wang, MD McLellan, MDM Leiserson, K Huang, ...
Nature communications 6 (1), 1-13, 2015
DNA hypomethylation within specific transposable element families associates with tissue-specific enhancer landscape
M Xie, C Hong, B Zhang, RF Lowdon, X Xing, D Li, X Zhou, HJ Lee, ...
Nature genetics 45 (7), 836–841, 2013
Comparative epigenomic annotation of regulatory DNA
S Xiao, D Xie, X Cao, P Yu, X Xing, CC Chen, M Musselman, M Xie, ...
Cell 149 (6), 1381-1392, 2012
Establishing guidelines to harmonize tumor mutational burden (TMB): in silico assessment of variation in TMB quantification across diagnostic platforms: phase I of the Friends …
DM Merino, LM McShane, D Fabrizio, V Funari, SJ Chen, JR White, ...
Journal for immunotherapy of cancer 8 (1), 2020
Estimating absolute methylation levels at single-CpG resolution from methylation enrichment and restriction enzyme sequencing methods
M Stevens, JB Cheng, D Li, M Xie, C Hong, CL Maire, KL Ligon, M Hirst, ...
Genome research 23 (9), 1541-1553, 2013
Systematic discovery of complex insertions and deletions in human cancers
K Ye, J Wang, R Jayasinghe, EW Lameijer, JF McMichael, J Ning, ...
Nature medicine 22 (1), 97-104, 2016
Divergent viral presentation among human tumors and adjacent normal tissues
S Cao, MC Wendl, MA Wyczalkowski, K Wylie, K Ye, R Jayasinghe, M Xie, ...
Scientific reports 6 (1), 1-12, 2016
The impact of chromosomal translocation locus and fusion oncogene coding sequence in synovial sarcomagenesis
KB Jones, JJ Barrott, M Xie, M Haldar, H Jin, JF Zhu, MJ Monument, ...
Oncogene 35 (38), 5021-5032, 2016
High Frequency Strand Slippage Mutations in CTCF in MSI‐Positive Endometrial Cancers
I Zighelboim, DG Mutch, A Knapp, L Ding, M Xie, DE Cohn, PJ Goodfellow
Human mutation 35 (1), 63-65, 2013
Aligning tumor mutational burden (TMB) quantification across diagnostic platforms: phase II of the Friends of Cancer Research TMB Harmonization Project
DM Vega, LM Yee, LM McShane, PM Williams, L Chen, T Vilimas, ...
Annals of Oncology 32 (12), 1626-1636, 2021
STAT3 Antisense Oligonucleotide Remodels the Suppressive Tumor Microenvironment to Enhance Immune Activation in Combination with Anti–PD-L1
TA Proia, M Singh, R Woessner, L Carnevalli, G Bommakanti, L Magiera, ...
Clinical Cancer Research 26 (23), 6335-6349, 2020
Cloning and characterization of chicken SPATA4 gene and analysis of its specific expression
M Xie, C Ai, X Jin, S Liu, S Tao, Z Li, Z Wang
Molecular and cellular biochemistry 306 (1-2), 79-85, 2007
Multifactorial Deep Learning Reveals Pan-Cancer Genomic Tumor Clusters with Distinct Immunogenomic Landscape and Response to ImmunotherapyDeep Learning Modeling Tumor Immune …
F Xie, J Zhang, J Wang, A Reuben, W Xu, X Yi, FS Varn, Y Ye, J Cheng, ...
Clinical Cancer Research 26 (12), 2908-2920, 2020
Endoplasmic Reticulum Mediated Necrosis-like Apoptosis of HeLa Cells Induced by Ca2+ Oscillation
Q Hu, J Chang, L Tao, G Yan, M Xie, Z Wang
BMB Reports 38 (6), 709-716, 2005
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