rMVP: a memory-efficient, visualization-enhanced, and parallel-accelerated tool for genome-wide association study L Yin, H Zhang, Z Tang, J Xu, D Yin, Z Zhang, X Yuan, M Zhu, S Zhao, X Li, ... Genomics, Proteomics and Bioinformatics 19 (4), 619-628, 2021 | 486 | 2021 |
Factors affecting the accuracy of genomic selection for agricultural economic traits in maize, cattle, and pig populations H Zhang, L Yin, M Wang, X Yuan, X Liu Frontiers in genetics 10, 441967, 2019 | 149 | 2019 |
KAML: improving genomic prediction accuracy of complex traits using machine learning determined parameters L Yin, H Zhang, X Zhou, X Yuan, S Zhao, X Li, X Liu Genome biology 21, 1-22, 2020 | 66 | 2020 |
Genome-wide association study reveals candidate genes for growth relevant traits in pigs Z Tang, J Xu, L Yin, D Yin, M Zhu, M Yu, X Li, S Zhao, X Liu Frontiers in genetics 10, 302, 2019 | 48 | 2019 |
A gene prioritization method based on a swine multi-omics knowledgebase and a deep learning model Y Fu, J Xu, Z Tang, L Wang, D Yin, Y Fan, D Zhang, F Deng, Y Zhang, ... Communications Biology 3 (1), 502, 2020 | 46 | 2020 |
Whole genome variants across 57 pig breeds enable comprehensive identification of genetic signatures that underlie breed features J Xu, Y Fu, Y Hu, L Yin, Z Tang, D Yin, M Zhu, M Yu, X Li, Y Zhou, S Zhao, ... Journal of Animal Science and Biotechnology 11, 1-16, 2020 | 21 | 2020 |
HIBLUP: an integration of statistical models on the BLUP framework for efficient genetic evaluation using big genomic data L Yin, H Zhang, Z Tang, D Yin, Y Fu, X Yuan, X Li, X Liu, S Zhao Nucleic Acids Research 51 (8), 3501-3512, 2023 | 18 | 2023 |
Genome-wide association study and fine mapping reveals candidate genes for birth weight of Yorkshire and Landrace pigs Y Li, B Li, M Yang, H Han, T Chen, Q Wei, Z Miao, L Yin, R Wang, J Shen, ... Frontiers in Genetics 11, 501520, 2020 | 17 | 2020 |
Natural functional SNPs in miR-155 alter its expression level, blood cell counts, and immune responses C Li, H He, A Liu, H Liu, H Huang, C Zhao, L Jing, J Ni, L Yin, S Hu, H Wu, ... Frontiers in Immunology 7, 214958, 2016 | 12 | 2016 |
IAnimal: a cross-species omics knowledgebase for animals Y Fu, H Liu, J Dou, Y Wang, Y Liao, X Huang, Z Tang, JY Xu, D Yin, S Zhu, ... Nucleic acids research 51 (D1), D1312-D1324, 2023 | 11 | 2023 |
A study of genome selection based on the porcine major economic traits. X Peng, LL Yin, QS Mei, HY Wang, XL Liu, MJ Zhu, XY Li, LL Fu, SH Zhao Acta Veterinaria et Zootechnica Sinica 50 (2), 439-445, 2019 | 11 | 2019 |
The progress and prospect of genomic selection models. L Yin, Y Ma, T Xiang, MJ Zhu, M Yu, XY Li, XL Liu, SH Zhao Acta Veterinaria et Zootechnica Sinica 50 (2), 233-242, 2019 | 10 | 2019 |
Identification of novel variants and candidate genes associated with porcine bone mineral density using genome-wide association study JH Nan, LL Yin, ZS Tang, T Xiang, GJ Ma, XY Li, XL Liu, SH Zhao, XD Liu Journal of Animal Science 98 (4), skaa052, 2020 | 6 | 2020 |
hibayes: an R package to fit individual-level, summary-level and single-step Bayesian regression models for genomic prediction and genome-wide association studies L Yin, H Zhang, X Li, S Zhao, X Liu BioRxiv, 2022.02. 12.480230, 2022 | 5 | 2022 |
Identification of new semen trait-related candidate genes in Duroc boars through genome-wide association and weighted gene co-expression network analyses Q Mei, C Fu, G Sahana, Y Chen, L Yin, Y Miao, S Zhao, T Xiang Journal of Animal Science 99 (7), skab188, 2021 | 4 | 2021 |
Association of single nucleotide polymorphism in NLRC3, NLRC5, HIP1, and LRP8 genes with fecal egg counts in goats naturally infected with Haemonchus contortus AI Omar, MBB Alam, DR Notter, S Zhao, MO Faruque, TNT Thi, L Yin, J Li, ... Tropical Animal Health and Production 52, 1583-1598, 2020 | 3 | 2020 |
Genetic parameter estimation and genome-wide association study (GWAS) of red blood cell count at three stages in a Duroc× Erhualian pig population J NAN, L YIN, Z TANG, J CHEN, J ZHANG, H WANG, X DU, X LIU Journal of Integrative Agriculture 19 (3), 793-799, 2020 | 3 | 2020 |
Transcriptomic basis of neutrophil ratio variation induced by poly I: C stimulation in porcine peripheral blood H Wang, Q Zhang, L Yin, X Liu, S Zhao, M Zhu, C Li Frontiers of Agricultural Science and Engineering 4 (3), 342-352, 2017 | 2 | 2017 |
Performing Genome-Wide Association Studies Using rMVP X Liu, L Yin, H Zhang, X Li, S Zhao Genome-Wide Association Studies, 219-245, 2022 | 1 | 2022 |
To evaluate the" two-step" genomic selection strategy in pig by simulation. Z Tang, D Yin, L Yin, Y Ma, T Xiang, M Zhu, M Yu, X Liu, X Li, X Qiu, ... | 1 | 2021 |