Abhishek Subramanian

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Ram Rup SarkarSenior Principal Scientist at CSIR-National Chemical Laboratory, Pune IndiaVerified email at ncl.res.in
Peter Carmeliethoogleraar, Universiteit van Leuven, VIBVerified email at kuleuven.vib.be
Tobias K KarakachAssistant Professor, Department of Pharmacology, Faculty of Medicine, Dalhousie UniversityVerified email at dal.ca
Joydev ChattopadhyayAgricultural and Ecological Research Unit, ISI, Kolkata, INDIAVerified email at isical.ac.in
Lucas TREPSCRCI2NA, UMR 1307 Inserm / UMR 6075 CNRS, Nantes, FranceVerified email at univ-nantes.fr
Katerina RohlenovaJunior group leader, Institute of Biotechnology, Czech Academy of SciencesVerified email at ibt.cas.cz
Shawez KhanNational Center for Cancer Immune Therapy, Department of Oncology, Herlev Hospital, DenmarkVerified email at jnu.ac.in
Jermaine GoveiaPhD candidate, KU LeuvenVerified email at vib-kuleuven.be
Santanu BiswasAssociate Professor, UEMVerified email at adamasuniversity.ac.in
Ibrahim ElmojtabaAssociate Professor of MathematicsVerified email at squ.edu.om
Jitesh JhawarAssistant Professor, Ahmedabad University, Ahmedabad, Gujarat, IndiaVerified email at ahduni.edu.in
Rupa BhowmickUniversity of MichiganVerified email at umich.edu
Swarnendu BanerjeePostdoctoral Researcher (DIEP Fellow), University of AmsterdamVerified email at uva.nl
Mira MousaNuffield Department of Women and Reproductive Health, University of OxfordVerified email at wrh.ox.ac.uk
Yvan SaeysVIB - Ghent UniversityVerified email at ugent.be
Pooya ZakeriAssociate Professor - Research Group Biomedical Informatics at UIO & Scientist @ VIB-KU LeuvenVerified email at esat.kuleuven.be
Fatima AlshamsiPhD CandidateVerified email at ku.ac.ae
Halima AlnaqbiKhalifa UniversityVerified email at ku.ac.ae
Sutanu NandiDevelopMed, a Marie Skłodowska-Curie (MSCA) Post-Doctoral Research Fellow

Abhishek Subramanian

Indian Institute of Technology Hyderabad (IITH)

Verified email at bt.iith.ac.in - Homepage

Systems Biology Constraint - based modeling Kinetic Modeling Comparative Genomics Machine Learning


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Single-cell RNA sequencing maps endothelial metabolic plasticity in pathological angiogenesis K Rohlenova, J Goveia, M García-Caballero, A Subramanian, J Kalucka, ... Cell metabolism 31 (4), 862-877. e14, 2020	175	2020
BIOMEX: an interactive workflow for (single cell) omics data interpretation and visualization F Taverna, J Goveia, TK Karakach, S Khan, K Rohlenova, L Treps, ... Nucleic acids research 48 (W1), W385-W394, 2020	42	2020
Optimal combinations of control strategies and cost-effective analysis for visceral leishmaniasis disease transmission S Biswas, A Subramanian, IM ELMojtaba, J Chattopadhyay, RR Sarkar PLoS One 12 (2), e0172465, 2017	36	2017
An integrative machine learning strategy for improved prediction of essential genes in Escherichia coli metabolism using flux-coupled features S Nandi, A Subramanian, RR Sarkar Molecular BioSystems 13 (8), 1584-1596, 2017	33	2017
Comparison of codon usage bias across Leishmania and Trypanosomatids to understand mRNA secondary structure, relative protein abundance and pathway functions A Subramanian, RR Sarkar Genomics 106 (4), 232-241, 2015	27	2015
Dissecting Leishmania infantum Energy Metabolism - A Systems Perspective A Subramanian, J Jhawar, RR Sarkar PLoS One 10 (9), e0137976, 2015	26	2015
Revealing the mystery of metabolic adaptations using a genome scale model of Leishmania infantum A Subramanian, RR Sarkar Scientific Reports 7 (doi:10.1038/s41598-017-10743-x), 10262, 2017	20	2017
Data in support of large scale comparative codon usage analysis in Leishmania and Trypanosomatids A Subramanian, RR Sarkar Data in Brief 4, 269-272, 2015	13	2015
The pulmonary vasculature in lethal COVID-19 and idiopathic pulmonary fibrosis at single-cell resolution LPMH de Rooij, LM Becker, LA Teuwen, B Boeckx, S Jansen, S Feys, ... Cardiovascular research 119 (2), 520-535, 2023	11	2023
Exploring the differences in metabolic behavior of astrocyte and glioblastoma: a flux balance analysis approach R Bhowmick, A Subramanian, RR Sarkar Systems and synthetic biology 9, 159-177, 2015	9	2015
Understanding Visceral Leishmaniasis Disease Transmission and its Control—A Study Based on Mathematical Modeling A Subramanian, V Singh, RR Sarkar Mathematics 3 (3), 913-944, 2015	9	2015
NETWORK STRUCTURE AND ENZYMATIC EVOLUTION IN LEISHMANIA METABOLISM: A COMPUTATIONAL STUDY A Subramanian, RR Sarkar BIOMAT 2015: International Symposium on Mathematical and Computational …, 2016	7	2016
Perspectives on Leishmania species and stage-specific adaptive mechanisms A Subramanian, RR Sarkar Trends in parasitology 34 (12), 1068-1081, 2018	6	2018
Exploring the role of GS–GOGAT cycle in microcystin synthesis and regulation–a model based analysis S Banerjee, A Subramanian, J Chattopadhyay, RR Sarkar Molecular BioSystems 13 (12), 2603-2614, 2017	5	2017
Angiogenesis goes computational–The future way forward to discover new angiogenic targets? A Subramanian, P Zakeri, M Mousa, H Alnaqbi, FY Alshamsi, L Bettoni, ... Computational and Structural Biotechnology Journal 20, 5235-5255, 2022	4	2022
Endothelial metabolism going single A Subramanian, LM Becker, P Carmeliet Nature Metabolism 3, 593–594, 2021	2	2021
BIOMEX: a software to alleviate the bottlenecks in the analysis-to-interpretation pipeline of omics datasets F Taverna, P Carmeliet, T Karakach, A Subramanian		2021
Method of Identification of Combinatorial Enzymatic Reaction Targets in Glioblastoma Specific Metabolic Network RR Sarkar, R Bhowmick, A Subramanian US Patent App. 15/779,798, 2018		2018
Evolutionary Perspectives of Genotype–Phenotype Factors in Leishmania Metabolism A Subramanian, RR Sarkar Journal of Molecular Evolution 86, 443-456, 2018		2018
Computational investigation of stage-specific and species specific factors of the leishmania parasite to understand the survival strategies A Subramanian Ph.D Thesis, 2018, 2018		2018

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