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James Koltes
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Identification of a putative quantitative trait nucleotide in guanylate binding protein 5 for host response to PRRS virus infection
JE Koltes, E Fritz-Waters, CJ Eisley, I Choi, H Bao, A Kommadath, ...
BMC genomics 16, 1-13, 2015
1012015
Putative regulatory factors associated with intramuscular fat content
ASM Cesar, LCA Regitano, JE Koltes, ER Fritz-Waters, DPD Lanna, ...
PLoS One 10 (6), e0128350, 2015
822015
Cholecystokinin is up-regulated in obese mouse islets and expands β-cell mass by increasing β-cell survival
JA Lavine, PW Raess, DS Stapleton, ME Rabaglia, JI Suhonen, ...
Endocrinology 151 (8), 3577-3588, 2010
732010
Design and validation of a 90K SNP genotyping assay for the water buffalo (Bubalus bubalis)
D Iamartino, EL Nicolazzi, CP Van Tassell, JM Reecy, ER Fritz-Waters, ...
PloS one 12 (10), e0185220, 2017
672017
Differences in the skeletal muscle transcriptome profile associated with extreme values of fatty acids content
ASM Cesar, LCA Regitano, MD Poleti, S Andrade, PC Tizioto, ...
BMC genomics 17 (1), 1-16, 2016
562016
A vision for development and utilization of high-throughput phenotyping and big data analytics in livestock
JE Koltes, JB Cole, R Clemmens, RN Dilger, LM Kramer, JK Lunney, ...
Frontiers in genetics 10, 1197, 2019
532019
Evaluation of variant identification methods for whole genome sequencing data in dairy cattle
CF Baes, MA Dolezal, JE Koltes, B Bapst, E Fritz-Waters, S Jansen, ...
BMC genomics 15 (1), 1-18, 2014
522014
Genomic analysis of Ugandan and Rwandan chicken ecotypes using a 600 k genotyping array
DS Fleming, JE Koltes, AD Markey, CJ Schmidt, CM Ashwell, ...
BMC genomics 17, 1-16, 2016
482016
Automated collection of heat stress data in livestock: new technologies and opportunities
JE Koltes, DA Koltes, BE Mote, J Tucker, DS Hubbell III
Translational Animal Science 2 (3), 319-323, 2018
462018
A nonsense mutation in cGMP-dependent type II protein kinase (PRKG2) causes dwarfism in American Angus cattle
JE Koltes, BP Mishra, D Kumar, RS Kataria, LR Totir, RL Fernando, ...
Proceedings of the National Academy of Sciences 106 (46), 19250-19255, 2009
452009
Identification of putative regulatory regions and transcription factors associated with intramuscular fat content traits
ASM Cesar, LCA Regitano, JM Reecy, MD Poleti, PSN Oliveira, ...
BMC genomics 19, 1-20, 2018
392018
Integrative analysis of microRNAs and mRNAs revealed regulation of composition and metabolism in Nelore cattle
GB Oliveira, LCA Regitano, ASM Cesar, JM Reecy, KY Degaki, MD Poleti, ...
BMC genomics 19, 1-16, 2018
382018
Gene co-expression analysis indicates potential pathways and regulators of beef tenderness in Nellore cattle
TM Gonçalves, LC de Almeida Regitano, JE Koltes, ASM Cesar, ...
Frontiers in genetics 9, 441, 2018
332018
A Limousin specific myostatin allele affects longissimus muscle area and fatty acid profiles in a Wagyu-Limousin F2 population,
LJ Alexander, LA Kuehn, TPL Smith, LK Matukumalli, B Mote, JE Koltes, ...
Journal of animal science 87 (5), 1576-1581, 2009
312009
A Limousin specific myostatin allele affects longissimus muscle area and fatty acid profiles in a Wagyu-Limousin F2 population,
LJ Alexander, LA Kuehn, TPL Smith, LK Matukumalli, B Mote, JE Koltes, ...
Journal of animal science 87 (5), 1576-1581, 2009
312009
Genetic architecture of gene expression underlying variation in host response to porcine reproductive and respiratory syndrome virus infection
A Kommadath, H Bao, I Choi, JM Reecy, JE Koltes, E Fritz-Waters, ...
Scientific Reports 7 (1), 46203, 2017
302017
Single nucleotide variant discovery of highly inbred Leghorn and Fayoumi chicken breeds using pooled whole genome resequencing data reveals insights into phenotype differences
DS Fleming, JE Koltes, ER Fritz-Waters, MF Rothschild, CJ Schmidt, ...
BMC genomics 17, 1-11, 2016
302016
Genome‐wide methylation profile following prenatal and postnatal dietary omega‐3 fatty acid supplementation in pigs
RL Boddicker, JE Koltes, ER Fritz‐Waters, L Koesterke, N Weeks, T Yin, ...
Animal genetics 47 (6), 658-671, 2016
292016
High-performance epistasis detection in quantitative trait GWAS
NT Weeks, GR Luecke, BM Groth, M Kraeva, L Ma, LM Kramer, JE Koltes, ...
The International Journal of High Performance Computing Applications 32 (3 …, 2018
242018
Gene co-expression network analysis unraveling transcriptional regulation of high-altitude adaptation of Tibetan pig
C Jia, X Kong, JE Koltes, X Gou, S Yang, D Yan, S Lu, Z Wei
PLoS One 11 (12), e0168161, 2016
242016
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Articles 1–20