Pleuni S Pennings
Pleuni S Pennings
Associate Professor, San Francisco State University
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Soft sweeps: molecular population genetics of adaptation from standing genetic variation
J Hermisson, PS Pennings
Genetics 169 (4), 2335-2352, 2005
Soft sweeps II—molecular population genetics of adaptation from recurrent mutation or migration
PS Pennings, J Hermisson
Molecular biology and evolution 23 (5), 1076-1084, 2006
Soft sweeps III: the signature of positive selection from recurrent mutation
PS Pennings, J Hermisson
PLoS genetics 2 (12), e186, 2006
Soft sweeps and beyond: understanding the patterns and probabilities of selection footprints under rapid adaptation
J Hermisson, PS Pennings
Methods in Ecology and Evolution 8 (6), 700-716, 2017
HIV drug resistance: problems and perspectives
PS Pennings
Infectious Disease Reports 5 (1S), 5, 2013
Imperfect drug penetration leads to spatial monotherapy and rapid evolution of multidrug resistance
S Moreno-Gamez, AL Hill, DIS Rosenbloom, DA Petrov, MA Nowak, ...
Proceedings of the National Academy of Sciences 112 (22), E2874-E2883, 2015
Loss and recovery of genetic diversity in adapting populations of HIV
PS Pennings, S Kryazhimskiy, J Wakeley
PLoS genetics 10 (1), e1004000, 2014
Polygenic adaptation: From sweeps to subtle frequency shifts
I Höllinger, PS Pennings, J Hermisson
PLoS genetics 15 (3), e1008035, 2019
Standing genetic variation and the evolution of drug resistance in HIV
PS Pennings
PLoS computational biology 8 (6), e1002527, 2012
An analytically tractable model for competitive speciation
PS Pennings, M Kopp, G Meszéna, U Dieckmann, J Hermisson
The American Naturalist 171 (1), E44-E71, 2008
Classroom sound can be used to classify teaching practices in college science courses
MT Owens, SB Seidel, M Wong, TE Bejines, S Lietz, JR Perez, S Sit, ...
Proceedings of the National Academy of Sciences 114 (12), 3085-3090, 2017
Natural enemies and sex: how seed predators and pathogens contribute to sex-differential reproductive success in a gynodioecious plant
C Collin, P Pennings, C Rueffler, A Widmer, J Shykoff
Oecologia 131, 94-102, 2002
Evidence of adaptation from ancestral variation in young populations of beach mice
VS Domingues, YP Poh, BK Peterson, PS Pennings, JD Jensen, ...
Evolution 66 (10), 3209-3223, 2012
Increased host aggression as an induced defense against slave-making ants
T Pamminger, I Scharf, PS Pennings, S Foitzik
Behavioral Ecology 22 (2), 255-260, 2011
More effective drugs lead to harder selective sweeps in the evolution of drug resistance in HIV-1
AF Feder, SY Rhee, SP Holmes, RW Shafer, DA Petrov, PS Pennings
Elife 5, e10670, 2016
Wolbachia Bacteria Effects after Experimental Interspecific Transfers in Terrestrial Isopods
T Rigaud, PS Pennings, P Juchault
Journal of invertebrate pathology 77 (4), 251-257, 2001
Collectively improving our teaching: attempting biology department–wide professional development in scientific teaching
MT Owens, G Trujillo, SB Seidel, CD Harrison, KM Farrar, HP Benton, ...
CBE—Life Sciences Education 17 (1), ar2, 2018
Specialization and local adaptation of a fungal parasite on two host plant species as revealed by two fitness traits
D Sicard, PS Pennings, C Grandclément, J Acosta, O Kaltz, JA Shykoff
Evolution 61 (1), 27-41, 2007
Fighting microbial drug resistance: a primer on the role of evolutionary biology in public health
GG Perron, RF Inglis, PS Pennings, S Cobey
Evolutionary applications 8 (3), 211-222, 2015
The population genetics of drug resistance evolution in natural populations of viral, bacterial and eukaryotic pathogens
BA Wilson, NR Garud, AF Feder, ZJ Assaf, PS Pennings
Molecular ecology 25 (1), 42-66, 2016
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