| Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking M Wang, JJ Carver, VV Phelan, LM Sanchez, N Garg, Y Peng, ... Nature biotechnology 34 (8), 828-837, 2016 | 3239 | 2016 |
| ProteomeXchange provides globally coordinated proteomics data submission and dissemination JA Vizcaíno, EW Deutsch, R Wang, A Csordas, F Reisinger, D Ríos, ... Nature biotechnology 32 (3), 223-226, 2014 | 2669 | 2014 |
| Mass spectral molecular networking of living microbial colonies J Watrous, P Roach, T Alexandrov, BS Heath, JY Yang, RD Kersten, ... Proceedings of the National Academy of Sciences 109 (26), E1743-E1752, 2012 | 968 | 2012 |
| The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition EW Deutsch, A Csordas, Z Sun, A Jarnuczak, Y Perez-Riverol, T Ternent, ... Nucleic acids research, gkw936, 2016 | 854 | 2016 |
| Feature-based molecular networking in the GNPS analysis environment LF Nothias, D Petras, R Schmid, K Dührkop, J Rainer, A Sarvepalli, ... Nature methods 17 (9), 905-908, 2020 | 798 | 2020 |
| The ProteomeXchange consortium in 2020: enabling ‘big data’approaches in proteomics EW Deutsch, N Bandeira, V Sharma, Y Perez-Riverol, JJ Carver, ... Nucleic acids research 48 (D1), D1145-D1152, 2020 | 645 | 2020 |
| Reproducible molecular networking of untargeted mass spectrometry data using GNPS AT Aron, EC Gentry, KL McPhail, LF Nothias, M Nothias-Esposito, ... Nature protocols 15 (6), 1954-1991, 2020 | 411 | 2020 |
| Molecular cartography of the human skin surface in 3D A Bouslimani, C Porto, CM Rath, M Wang, Y Guo, A Gonzalez, ... Proceedings of the National Academy of Sciences 112 (17), E2120-E2129, 2015 | 388 | 2015 |
| MS/MS networking guided analysis of molecule and gene cluster families DD Nguyen, CH Wu, WJ Moree, A Lamsa, MH Medema, X Zhao, ... Proceedings of the National Academy of Sciences 110 (28), E2611-E2620, 2013 | 284 | 2013 |
| The generating function of CID, ETD, and CID/ETD pairs of tandem mass spectra: applications to database search S Kim, N Mischerikow, N Bandeira, JD Navarro, L Wich, S Mohammed, ... Molecular & Cellular Proteomics 9 (12), 2840-2852, 2010 | 283 | 2010 |
| Clustering millions of tandem mass spectra AM Frank, N Bandeira, Z Shen, S Tanner, SP Briggs, RD Smith, ... Journal of proteome research 7 (01), 113-122, 2008 | 279 | 2008 |
| Interkingdom metabolic transformations captured by microbial imaging mass spectrometry WJ Moree, VV Phelan, CH Wu, N Bandeira, DS Cornett, BM Duggan, ... Proceedings of the National Academy of Sciences 109 (34), 13811-13816, 2012 | 276 | 2012 |
| Molecular networking and pattern-based genome mining improves discovery of biosynthetic gene clusters and their products from Salinispora species KR Duncan, M Crüsemann, A Lechner, A Sarkar, J Li, N Ziemert, M Wang, ... Chemistry & biology 22 (4), 460-471, 2015 | 201 | 2015 |
| Protein identification by spectral networks analysis N Bandeira, D Tsur, A Frank, PA Pevzner Proceedings of the National Academy of Sciences 104 (15), 6140-6145, 2007 | 196 | 2007 |
| The ProteomeXchange consortium at 10 years: 2023 update EW Deutsch, N Bandeira, Y Perez-Riverol, V Sharma, JJ Carver, ... Nucleic acids research 51 (D1), D1539-D1548, 2023 | 195 | 2023 |
| Mass spectrometry searches using MASST M Wang, AK Jarmusch, F Vargas, AA Aksenov, JM Gauglitz, K Weldon, ... Nature biotechnology 38 (1), 23-26, 2020 | 183 | 2020 |
| A high-stringency blueprint of the human proteome S Adhikari, EC Nice, EW Deutsch, L Lane, GS Omenn, SR Pennington, ... Nature communications 11 (1), 5301, 2020 | 181 | 2020 |
| Significance estimation for large scale metabolomics annotations by spectral matching K Scheubert, F Hufsky, D Petras, M Wang, LF Nothias, K Dührkop, ... Nature Communications 8 (1), 1494, 2017 | 179 | 2017 |
| Fast multi-blind modification search through tandem mass spectrometry S Na, N Bandeira, E Paek Molecular & Cellular Proteomics 11 (4), 2012 | 179 | 2012 |
| Target-decoy approach and false discovery rate: when things may go wrong N Gupta, N Bandeira, U Keich, PA Pevzner Journal of the American Society for Mass Spectrometry 22, 1111-1120, 2011 | 178 | 2011 |
