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John Jumper
John Jumper
DeepMind
Dirección de correo verificada de google.com
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Highly accurate protein structure prediction with AlphaFold
J Jumper, R Evans, A Pritzel, T Green, M Figurnov, O Ronneberger, ...
nature 596 (7873), 583-589, 2021
245502021
AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models
M Varadi, S Anyango, M Deshpande, S Nair, C Natassia, G Yordanova, ...
Nucleic acids research 50 (D1), D439-D444, 2022
48252022
Improved protein structure prediction using potentials from deep learning
AW Senior, R Evans, J Jumper, J Kirkpatrick, L Sifre, T Green, C Qin, ...
Nature 577 (7792), 706-710, 2020
31482020
Highly accurate protein structure prediction for the human proteome
K Tunyasuvunakool, J Adler, Z Wu, T Green, M Zielinski, A Žídek, ...
Nature 596 (7873), 590-596, 2021
21592021
Atomic-level characterization of the structural dynamics of proteins
DE Shaw, P Maragakis, K Lindorff-Larsen, S Piana, RO Dror, ...
Science 330 (6002), 341-346, 2010
20432010
Protein complex prediction with AlphaFold-Multimer
R Evans, M O’Neill, A Pritzel, N Antropova, A Senior, T Green, A Žídek, ...
biorxiv, 2021.10. 04.463034, 2021
19192021
Effective gene expression prediction from sequence by integrating long-range interactions
Ž Avsec, V Agarwal, D Visentin, JR Ledsam, A Grabska-Barwinska, ...
Nature methods 18 (10), 1196-1203, 2021
5862021
Oncogenic mutations counteract intrinsic disorder in the EGFR kinase and promote receptor dimerization
Y Shan, MP Eastwood, X Zhang, ET Kim, A Arkhipov, RO Dror, J Jumper, ...
Cell 149 (4), 860-870, 2012
4062012
Accurate proteome-wide missense variant effect prediction with AlphaMissense
J Cheng, G Novati, J Pan, C Bycroft, A Žemgulytė, T Applebaum, A Pritzel, ...
Science 381 (6664), eadg7492, 2023
3522023
Protein structure prediction using multiple deep neural networks in the 13th Critical Assessment of Protein Structure Prediction (CASP13)
AW Senior, R Evans, J Jumper, J Kirkpatrick, L Sifre, T Green, C Qin, ...
Proteins: structure, function, and bioinformatics 87 (12), 1141-1148, 2019
3332019
Applying and improving AlphaFold at CASP14
J Jumper, R Evans, A Pritzel, T Green, M Figurnov, O Ronneberger, ...
Proteins: Structure, Function, and Bioinformatics 89 (12), 1711-1721, 2021
2922021
Accurate structure prediction of biomolecular interactions with AlphaFold 3
J Abramson, J Adler, J Dunger, R Evans, T Green, A Pritzel, ...
Nature, 1-3, 2024
2142024
Innovative scattering analysis shows that hydrophobic disordered proteins are expanded in water
JA Riback, MA Bowman, AM Zmyslowski, CR Knoverek, JM Jumper, ...
Science 358 (6360), 238-241, 2017
2082017
Highly accurate protein structure prediction with AlphaFold., 2021, 596
J Jumper, R Evans, A Pritzel, T Green, M Figurnov, O Ronneberger, ...
DOI: https://doi. org/10.1038/s41586-021-03819-2, 583-589, 0
163
Protein structure predictions to atomic accuracy with AlphaFold
J Jumper, D Hassabis
Nature methods 19 (1), 11-12, 2022
1582022
Accelerating large language model decoding with speculative sampling
C Chen, S Borgeaud, G Irving, JB Lespiau, L Sifre, J Jumper
arXiv preprint arXiv:2302.01318, 2023
1552023
High accuracy protein structure prediction using deep learning
J Jumper, R Evans, A Pritzel, T Green, M Figurnov, K Tunyasuvunakool, ...
Fourteenth critical assessment of techniques for protein structure …, 2020
1552020
De novo structure prediction with deeplearning based scoring
R Evans, J Jumper, J Kirkpatrick, L Sifre, T Green, C Qin, A Zidek, ...
Annu Rev Biochem 77 (363-382), 6, 2018
1532018
Loss of conformational entropy in protein folding calculated using realistic ensembles and its implications for NMR-based calculations
MC Baxa, EJ Haddadian, JM Jumper, KF Freed, TR Sosnick
Proceedings of the National Academy of Sciences 111 (43), 15396-15401, 2014
1172014
AlphaFold Protein Structure Database in 2024: providing structure coverage for over 214 million protein sequences
M Varadi, D Bertoni, P Magana, U Paramval, I Pidruchna, ...
Nucleic acids research 52 (D1), D368-D375, 2024
722024
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