Jeffrey E. Barrick

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Ronald BreakerYale UniversityVerified email at yale.edu
Richard LenskiMicrobiology / EEB / Michigan State UniversityVerified email at msu.edu
Wade WinklerDepartment of Cell Biology and Molecular Biology, University of MarylandVerified email at umd.edu
Ali NahviHead of Platform Research, Flagship Labs 85, Inc.Verified email at fl85inc.com
Walter L. RuzzoProfessor, University of WashingtonVerified email at uw.edu
Zasha WeinbergLeipzig UniversityVerified email at bioinf.uni-leipzig.de
Dominique SchneiderProfessor in Molecular Evolution, University Joseph Fourier GrenobleVerified email at univ-grenoble-alpes.fr
Sean P. LeonardPostdoctoral Researcher at Lawrence Livermore National LabVerified email at utexas.edu
J. Kenneth WickiserGlobal Alliance for Preventing Pandemics | Columbia UniversityVerified email at columbia.edu
Olivier TenaillonUniversité de Paris, University Paris Nord, INSERM , Professor Ecole PolytechniqueVerified email at inserm.fr
Claudine MEDIGUECEA/IG/Genoscope & CNRS UMR8030Verified email at genoscope.cns.fr
Stéphane CruveillerChercheur CEAVerified email at genoscope.cns.fr
Aurko DasguptaBaylor College of MedicineVerified email at bcm.edu
Andrew EllingtonProfessor of Molecular Biosciences, Center for Systems and Synthetic Biology, University of Texas at AustinVerified email at austin.utexas.edu
Nancy A. MoranProfessor of Integrative Biology, University of Texas at AustinVerified email at austin.utexas.edu
Zizhen YaoAllen Institute for Brain ScienceVerified email at alleninstitute.org
Michael HammerlingTeam Lead, Opentrons/PRL/NeoVerified email at reopenlabs.com
Erik M QuandtThe University of Texas at AustinVerified email at utexas.edu
Zachary D. BlountResearch Assistant Professor, Dept. of Microbiology and Molecular Genetics, Michigan StateVerified email at msu.edu
Richard RobertsUniversity of Southern CaliforniaVerified email at usc.edu

Jeffrey E. Barrick

Department of Molecular Biosciences, The University of Texas at Austin

Verified email at cm.utexas.edu - Homepage

microbial genomics experimental evolution synthetic biology


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Genome evolution and adaptation in a long-term experiment with Escherichia coli JE Barrick, DS Yu, SH Yoon, H Jeong, TK Oh, D Schneider, RE Lenski, ... Nature 461 (7268), 1243-1247, 2009	1349	2009
Identification of Mutations in Laboratory-Evolved Microbes from Next-Generation Sequencing Data Using breseq DE Deatherage, JE Barrick Engineering and analyzing multicellular systems: methods and protocols, 165-188, 2014	1088	2014
Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria M Mandal, B Boese, JE Barrick, WC Winkler, RR Breaker cell 113 (5), 577-586, 2003	888	2003
Genome dynamics during experimental evolution JE Barrick, RE Lenski Nature Reviews Genetics 14 (12), 827-839, 2013	670	2013
Genomic analysis of a key innovation in an experimental Escherichia coli population ZD Blount, JE Barrick, CJ Davidson, RE Lenski Nature 489 (7417), 513-518, 2012	629	2012
A glycine-dependent riboswitch that uses cooperative binding to control gene expression M Mandal, M Lee, JE Barrick, Z Weinberg, GM Emilsson, WL Ruzzo, ... Science 306 (5694), 275-279, 2004	618	2004
The dynamics of molecular evolution over 60,000 generations BH Good, MJ McDonald, JE Barrick, RE Lenski, MM Desai Nature 551 (7678), 45-50, 2017	598	2017
New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control JE Barrick, KA Corbino, WC Winkler, A Nahvi, M Mandal, J Collins, M Lee, ... Proceedings of the National Academy of Sciences 101 (17), 6421-6426, 2004	575	2004
The distributions, mechanisms, and structures of metabolite-binding riboswitches JE Barrick, RR Breaker Genome biology 8 (11), 1-19, 2007	543	2007
Metabolite-binding RNA domains are present in the genes of eukaryotes N Sudarsan, JE Barrick, RR Breaker Rna 9 (6), 644-647, 2003	531	2003
An mRNA structure that controls gene expression by binding S-adenosylmethionine WC Winkler, A Nahvi, N Sudarsan, JE Barrick, RR Breaker Nature Structural & Molecular Biology 10 (9), 701-707, 2003	522	2003
Repeatability and contingency in the evolution of a key innovation in phage lambda JR Meyer, DT Dobias, JS Weitz, JE Barrick, RT Quick, RE Lenski Science 335 (6067), 428-432, 2012	467	2012
Tempo and mode of genome evolution in a 50,000-generation experiment O Tenaillon, JE Barrick, N Ribeck, DE Deatherage, JL Blanchard, ... Nature 536 (7615), 165-170, 2016	424	2016
Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline Z Weinberg, JE Barrick, Z Yao, A Roth, JN Kim, J Gore, JX Wang, ER Lee, ... Nucleic acids research 35 (14), 4809-4819, 2007	384	2007
Coenzyme B₁₂ riboswitches are widespread genetic control elements in prokaryotes A Nahvi, JE Barrick, RR Breaker Nucleic acids research 32 (1), 143-150, 2004	377	2004
Second-order selection for evolvability in a large Escherichia coli population RJ Woods, JE Barrick, TF Cooper, U Shrestha, MR Kauth, RE Lenski Science 331 (6023), 1433-1436, 2011	345	2011
Tandem riboswitch architectures exhibit complex gene control functions N Sudarsan, MC Hammond, KF Block, R Welz, JE Barrick, A Roth, ... Science 314 (5797), 300-304, 2006	300	2006
6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter JE Barrick, N Sudarsan, Z Weinberg, WL Ruzzo, RR Breaker Rna 11 (5), 774-784, 2005	293	2005
Evidence for a second class of S-adenosylmethionine riboswitches and other regulatory RNA motifs in alpha-proteobacteria KA Corbino, JE Barrick, J Lim, R Welz, BJ Tucker, I Puskarz, M Mandal, ... Genome biology 6, 1-10, 2005	275	2005
A riboswitch selective for the queuosine precursor preQ1 contains an unusually small aptamer domain A Roth, WC Winkler, EE Regulski, BWK Lee, J Lim, I Jona, JE Barrick, ... Nature structural & molecular biology 14 (4), 308-317, 2007	273	2007

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