Follow
Arun Konagurthu
Arun Konagurthu
Department of Data Science and AI, Monash University
Verified email at monash.edu - Homepage
Title
Cited by
Cited by
Year
MUSTANG: a multiple structural alignment algorithm
AS Konagurthu, JC Whisstock, PJ Stuckey, AM Lesk
Proteins: Structure, Function, and Bioinformatics 64 (3), 559-574, 2006
7482006
On the origin of distribution patterns of motifs in biological networks
AS Konagurthu, AM Lesk
BMC Systems Biology 2 (1), 1-8, 2008
532008
MUSTANG-MR structural sieving server: applications in protein structural analysis and crystallography
AS Konagurthu, CF Reboul, JW Schmidberger, JA Irving, AM Lesk, ...
PLoS One 5 (4), e10048, 2010
492010
Minimum message length inference of secondary structure from protein coordinate data
AS Konagurthu, AM Lesk, L Allison
Bioinformatics 28 (12), i97-i105, 2012
452012
Structural search and retrieval using a tableau representation of protein folding patterns
AS Konagurthu, PJ Stuckey, AM Lesk
Bioinformatics 24 (5), 645-651, 2008
312008
Efficient large-scale protein sequence comparison and gene matching to identify orthologs and co-orthologs
K Mahmood, GI Webb, J Song, JC Whisstock, AS Konagurthu
Nucleic acids research 40 (6), e44-e44, 2012
302012
A fast indexing approach for protein structure comparison
L Zhang, J Bailey, AS Konagurthu, K Ramamohanarao
BMC bioinformatics 11 (1), 1-9, 2010
182010
Statistical inference of protein structural alignments using information and compression
JH Collier, L Allison, AM Lesk, PJ Stuckey, M Garcia de la Banda, ...
Bioinformatics 33 (7), 1005-1013, 2017
172017
Progressive multiple alignment using sequence triplet optimizations and three-residue exchange costs
AS Konagurthu, J Whisstock, PJ Stuckey
Journal of Bioinformatics and Computational Biology 2 (04), 719-745, 2004
172004
A new statistical framework to assess structural alignment quality using information compression
JH Collier, L Allison, AM Lesk, M Garcia de la Banda, AS Konagurthu
Bioinformatics 30 (17), i512-i518, 2014
162014
Single and multiple input modules in regulatory networks
AS Konagurthu, AM Lesk
Proteins: Structure, Function, and Bioinformatics 73 (2), 320-324, 2008
142008
EGM: encapsulated gene-by-gene matching to identify gene orthologs and homologous segments in genomes
K Mahmood, AS Konagurthu, J Song, AM Buckle, GI Webb, JC Whisstock
Bioinformatics 26 (17), 2076-2084, 2010
132010
Piecewise linear approximation of protein structures using the principle of minimum message length
AS Konagurthu, L Allison, PJ Stuckey, AM Lesk
Bioinformatics 27 (13), i43-i51, 2011
112011
Optimal sum-of-pairs multiple sequence alignment using incremental Carrillo and Lipman bounds
AS Konagurthu, PJ Stuckey
Journal of Computational Biology 13 (3), 668-685, 2006
112006
An information measure for comparing top k lists
JH Collier, AS Konagurthu
2014 IEEE 10th international conference on e-science 1, 127-134, 2014
9*2014
Super: a web server to rapidly screen superposable oligopeptide fragments from the protein data bank
JH Collier, AM Lesk, M Garcia de la Banda, AS Konagurthu
Nucleic acids research 40 (W1), W334-W339, 2012
92012
On Sufficient Statistics of Least-Squares Superposition of Vector Sets
AS Konagurthu, P Kasarapu, L Allison, JH Collier, AM Lesk
Journal of Computational Biology 22 (6), 487-497, 2015
82015
Cataloging topologies of protein folding patterns
AS Konagurthu, AM Lesk
Journal of Molecular Recognition: An Interdisciplinary Journal 23 (2), 253-257, 2010
72010
Universal architectural concepts underlying protein folding patterns
AS Konagurthu, R Subramanian, L Allison, D Abramson, PJ Stuckey, ...
Frontiers in molecular biosciences 7, 491, 2021
52021
Statistical compression of protein sequences and inference of marginal probability landscapes over competing alignments using finite state models and Dirichlet priors
D Sumanaweera, L Allison, AS Konagurthu
Bioinformatics 35 (14), i360-i369, 2019
52019
The system can't perform the operation now. Try again later.
Articles 1–20