Sherry L Jenkins
Sherry L Jenkins
Program Director, Icahn School of Medicine at Mount Sinai, New York, NY
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Enrichr: a comprehensive gene set enrichment analysis web server 2016 update
MV Kuleshov, MR Jones, AD Rouillard, NF Fernandez, Q Duan, Z Wang, ...
Nucleic acids research 44 (W1), W90-W97, 2016
Gene set knowledge discovery with enrichr
Z Xie, A Bailey, MV Kuleshov, DJB Clarke, JE Evangelista, SL Jenkins, ...
Current protocols 1 (3), e90, 2021
Formation of regulatory patterns during signal propagation in a mammalian cellular network
A Ma'ayan, SL Jenkins, S Neves, A Hasseldine, E Grace, B Dubin-Thaler, ...
Science 309 (5737), 1078, 2005
The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations
AB Keenan, SL Jenkins, KM Jagodnik, S Koplev, E He, D Torre, Z Wang, ...
Cell systems 6 (1), 13-24, 2018
Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd
Z Wang, CD Monteiro, KM Jagodnik, NF Fernandez, GW Gundersen, ...
Nature communications 7 (1), 1-11, 2016
Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data
A Koleti, R Terryn, V Stathias, C Chung, DJ Cooper, JP Turner, D Vidović, ...
Nucleic acids research 46 (D1), D558-D566, 2018
Network analysis of FDA approved drugs and their targets
A Ma'ayan, SL Jenkins, J Goldfarb, R Iyengar
Mount Sinai Journal of Medicine: A Journal of Translational and Personalized …, 2007
Systems approach to explore components and interactions in the presynapse
NS Abul‐Husn, I Bushlin, JA Morón, SL Jenkins, G Dolios, R Wang, ...
Proteomics 9 (12), 3303-3315, 2009
Systems Biology--Biomedical Modeling
EA Sobie, YS Lee, SL Jenkins, R Iyengar
Science Signaling 4 (190), tr2, 2011
Neuro2A Differentiation by Gαi/o Pathway
A Ma'ayan, SL Jenkins, A Barash, R Iyengar
Science signaling 2 (54), cm1-cm1, 2009
SNAVI: Desktop application for analysis and visualization of large-scale signaling networks
A Ma'ayan, SL Jenkins, RL Webb, SI Berger, SP Purushothaman, ...
BMC Systems Biology 3 (1), 10, 2009
Genes2WordCloud: a quick way to identify biological themes from gene lists and free text
C Baroukh, SL Jenkins, R Dannenfelser, A Ma'Ayan
Source code for biology and medicine 6 (1), 1-5, 2011
Connectivity mapping: methods and applications
AB Keenan, ML Wojciechowicz, Z Wang, KM Jagodnik, SL Jenkins, ...
Annual Review of Biomedical Data Science, 69-92, 2019
Appyters: Turning Jupyter Notebooks into data-driven web apps
DJB Clarke, M Jeon, DJ Stein, N Moiseyev, E Kropiwnicki, C Dai, Z Xie, ...
Patterns 2 (3), 100213, 2021
FAIRshake: toolkit to evaluate the FAIRness of research digital resources
DJB Clarke, L Wang, A Jones, ML Wojciechowicz, D Torre, KM Jagodnik, ...
Cell systems 9 (5), 417-421, 2019
Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop
KM Jagodnik, S Koplev, SL Jenkins, L Ohno-Machado, B Paten, ...
Journal of biomedical informatics 71, 49-57, 2017
Systems pharmacology meets predictive, preventive, personalized and participatory medicine
SL Jenkins, A Ma’ayan
Pharmacogenomics 14 (2), 119-122, 2013
Inquiry learning. Integrating content detail and critical reasoning by peer review
R Iyengar, MA Diverse-Pierluissi, SL Jenkins, AM Chan, LA Devi, ...
Science 319 (5867), 1189, 2008
FAIRshake: toolkit to evaluate the findability, accessibility, interoperability, and reusability of research digital resources
DJB Clarke, L Wang, A Jones, ML Wojciechowicz, D Torre, KM Jagodnik, ...
BioRxiv, 657676, 2019
Training in systems pharmacology: predoctoral program in pharmacology and systems biology at Mount Sinai School of Medicine
EA Sobie, SL Jenkins, R Iyengar, TA Krulwich
Clinical Pharmacology & Therapeutics 88 (1), 19-22, 2010
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