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James Theiler
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Testing for nonlinearity in time series: the method of surrogate data
J Theiler, S Eubank, A Longtin, B Galdrikian, JD Farmer
Physica D: Nonlinear Phenomena 58 (1-4), 77-94, 1992
45261992
Tracking changes in SARS-CoV-2 spike: evidence that D614G increases infectivity of the COVID-19 virus
B Korber, WM Fischer, S Gnanakaran, H Yoon, J Theiler, W Abfalterer, ...
Cell 182 (4), 812-827. e19, 2020
33432020
GNU scientific library reference manual
M Galassi, J Davies, J Theiler, B Gough, G Jungman, P Alken, M Booth, ...
URL http://www. gnu. org/software/gsl, 2007
2878*2007
Timing the ancestor of the HIV-1 pandemic strains
B Korber, M Muldoon, J Theiler, F Gao, R Gupta, A Lapedes, BH Hahn, ...
science 288 (5472), 1789-1796, 2000
15022000
Spurious dimension from correlation algorithms applied to limited time-series data
J Theiler
Physical review A 34 (3), 2427, 1986
13111986
Estimating fractal dimension
J Theiler
JOSA A 7 (6), 1055-1073, 1990
12301990
Generating surrogate data for time series with several simultaneously measured variables
D Prichard, J Theiler
Physical review letters 73 (7), 951, 1994
6761994
Accurate on-line support vector regression
J Ma, J Theiler, S Perkins
Neural computation 15 (11), 2683-2703, 2003
5322003
Accelerated search for materials with targeted properties by adaptive design
D Xue, PV Balachandran, J Hogden, J Theiler, D Xue, T Lookman
Nature communications 7 (1), 1-9, 2016
5122016
Polyvalent vaccines for optimal coverage of potential T-cell epitopes in global HIV-1 variants
W Fischer, S Perkins, J Theiler, T Bhattacharya, K Yusim, R Funkhouser, ...
Nature medicine 13 (1), 100-106, 2007
4852007
Spike mutation pipeline reveals the emergence of a more transmissible form of SARS-CoV-2
B Korber, WM Fischer, S Gnanakaran, H Yoon, J Theiler, W Abfalterer, ...
BioRxiv, 2020
4672020
Advantage of rare HLA supertype in HIV disease progression
E Trachtenberg, B Korber, C Sollars, TB Kepler, PT Hraber, E Hayes, ...
Nature medicine 9 (7), 928-935, 2003
4292003
Grafting: Fast, incremental feature selection by gradient descent in function space
S Perkins, K Lacker, J Theiler
The Journal of Machine Learning Research 3, 1333-1356, 2003
4292003
Phenotypic properties of transmitted founder HIV-1
NF Parrish, F Gao, H Li, EE Giorgi, HJ Barbian, EH Parrish, L Zajic, ...
Proceedings of the National Academy of Sciences 110 (17), 6626-6633, 2013
4262013
Re-examination of the evidence for low-dimensional, nonlinear structure in the human electroencephalogram
J Theiler, PE Rapp
Electroencephalography and clinical Neurophysiology 98 (3), 213-222, 1996
4061996
Constrained-realization Monte-Carlo method for hypothesis testing
J Theiler, D Prichard
Physica D: Nonlinear Phenomena 94 (4), 221-235, 1996
3591996
Efficient algorithm for estimating the correlation dimension from a set of discrete points
J Theiler
Physical review A 36 (9), 4456, 1987
3491987
Some comments on the correlation dimension of 1/fα noise
J Theiler
Physics letters A 155 (8-9), 480-493, 1991
3331991
SARS-CoV-2 variant B. 1.1. 7 is susceptible to neutralizing antibodies elicited by ancestral spike vaccines
X Shen, H Tang, C McDanal, K Wagh, W Fischer, J Theiler, H Yoon, D Li, ...
Cell host & microbe 29 (4), 529-539. e3, 2021
3222021
Using surrogate data to detect nonlinearity in time series
J Theiler, B Galdrikian, A Longtin, S Eubank, JD Farmer
Los Alamos National Lab., NM (United States), 1991
2821991
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