| Transcriptional autoregulation by BRCA1 A De Siervi, P De Luca, JS Byun, LJ Di, T Fufa, CM Haggerty, E Vazquez, ... Cancer research 70 (2), 532-542, 2010 | 99 | 2010 |
| A direct link between MITF, innate immunity, and hair graying ML Harris, TD Fufa, JW Palmer, SS Joshi, DM Larson, A Incao, DE Gildea, ... PLoS biology 16 (5), e2003648, 2018 | 56 | 2018 |
| ELL facilitates RNA polymerase II pause site entry and release JS Byun, TD Fufa, C Wakano, A Fernandez, CM Haggerty, MH Sung, ... Nature communications 3 (1), 633, 2012 | 48 | 2012 |
| Identifying core biological processes distinguishing human eye tissues with precise systems-level gene expression analyses and weighted correlation networks JM Bryan, TD Fufa, K Bharti, BP Brooks, RB Hufnagel, DM McGaughey Human molecular genetics 27 (19), 3325-3339, 2018 | 45 | 2018 |
| Genomic analysis reveals distinct mechanisms and functional classes of SOX10-regulated genes in melanocytes TD Fufa, ML Harris, DE Watkins-Chow, D Levy, DU Gorkin, DE Gildea, ... Human molecular genetics 24 (19), 5433-5450, 2015 | 43 | 2015 |
| Hypoxia‐induced HIF1α targets in melanocytes reveal a molecular profile associated with poor melanoma prognosis SK Loftus, LL Baxter, JC Cronin, TD Fufa, ... Pigment cell & melanoma research 30 (3), 339-352, 2017 | 38 | 2017 |
| Building the mega single-cell transcriptome ocular meta-atlas VS Swamy, TD Fufa, RB Hufnagel, DM McGaughey GigaScience 10 (10), giab061, 2021 | 35 | 2021 |
| Conserved Gsx2/Ind homeodomain monomer versus homodimer DNA binding defines regulatory outcomes in flies and mice J Salomone, S Qin, TD Fufa, B Cain, E Farrow, B Guan, RB Hufnagel, ... Genes & development 35 (1-2), 157-174, 2021 | 21 | 2021 |
| MEK inhibition remodels the active chromatin landscape and induces SOX10 genomic recruitment in BRAF (V600E) mutant melanoma cells TD Fufa, LL Baxter, JC Wedel, DE Gildea, ... Epigenetics & Chromatin 12, 1-18, 2019 | 15 | 2019 |
| The Tax oncogene enhances ELL incorporation into p300 and P-TEFb containing protein complexes to activate transcription TD Fufa, JS Byun, C Wakano, AG Fernandez, CA Pise-Masison, ... Biochemical and Biophysical Research Communications 465 (1), 5-11, 2015 | 6 | 2015 |
| A long read optimized de novo transcriptome pipeline reveals novel ocular developmentally regulated gene isoforms and disease targets VS Swamy, TD Fufa, RB Hufnagel, DM McGaughey | 3 | 2020 |
| Axing the cancer loop. TD Fufa, WJ Pavan Pigment Cell & Melanoma Research 27 (5), 2014 | 1 | 2014 |
| P488: Interrogating the pathologic noncoding genome with tissue-specific multiomics R Hufnagel, D McGaughey, A Mungale, K Kaya, B Guan, M Brinkmeier, ... Genetics in Medicine Open 1 (1), 2023 | | 2023 |
| Transcriptional mapping of the macaque retina and RPE-choroid reveals conserved inter-tissue transcription drivers and signaling pathways A Mungale, DM McGaughey, C Zhang, S Yousaf, J Liu, BP Brooks, ... Frontiers in Genetics 13, 949449, 2022 | | 2022 |
| Generating and characterizing iPSC-RPE cells for studying disease mechanisms in peroxisomal biogenesis disorders C Feldman, T Fufa, RB Hufnagel, M Benson Investigative Ophthalmology & Visual Science 63 (7), 2472–F0179-2472–F0179, 2022 | | 2022 |
| Million Cell Retina Transcriptome Meta-Atlas for All D McGaughey, V Swamy, Z Batz, T Fufa, RB Hufnagel Investigative Ophthalmology & Visual Science 62 (8), 2609-2609, 2021 | | 2021 |
| A short-read de novo transcriptome construction pipeline optimized by long reads reveals novel developmentally regulated gene isoforms and disease targets in … VS Swamy, TD Fufa, RB Hufnagel, DM McGaughey bioRxiv, 2020.08. 21.261644, 2020 | | 2020 |
| Regional transcriptome map of the adult rhesus macaque retina and RPE-choroid A Mungale, TD Fufa, D McGaughey, C Zhang, A Maminishkis, SS Miller, ... Investigative Ophthalmology & Visual Science 60 (9), 998-998, 2019 | | 2019 |
| Investigating the role of Kit in ocular melanocyte development and vision M Han, IF Onojafe, MR Ahmed, MM Campos, TD Fufa, T Cogliati, ... Investigative Ophthalmology & Visual Science 60 (9), 4315-4315, 2019 | | 2019 |
| Dwarf gecko as a model for studying retinal neurogenesis (P1. 9-012) A Mendez, A Wegerski, Z Li, T Fufa, R Hufnagel Neurology 92 (15 Supplement), 2019 | | 2019 |
