| PHENIX: a comprehensive Python-based system for macromolecular structure solution PD Adams, PV Afonine, G Bunkóczi, VB Chen, IW Davis, N Echols, ... Acta Crystallographica Section D: Biological Crystallography 66 (2), 213-221, 2010 | 21595 | 2010 |
| MolProbity: all-atom structure validation for macromolecular crystallography VB Chen, WB Arendall, JJ Headd, DA Keedy, RM Immormino, GJ Kapral, ... Acta Crystallographica Section D: Biological Crystallography 66 (1), 12-21, 2010 | 12886 | 2010 |
| Structure validation by Cα geometry: ϕ, ψ and Cβ deviation SC Lovell, IW Davis, WB Arendall III, PIW De Bakker, JM Word, ... Proteins: Structure, Function, and Bioinformatics 50 (3), 437-450, 2003 | 5266 | 2003 |
| The anatomy and taxonomy of protein structure JS Richardson Advances in protein chemistry 34, 167-339, 1981 | 4481 | 1981 |
| MolProbity: all-atom contacts and structure validation for proteins and nucleic acids IW Davis, A Leaver-Fay, VB Chen, JN Block, GJ Kapral, X Wang, ... Nucleic acids research 35 (suppl_2), W375-W383, 2007 | 4002 | 2007 |
| Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix D Liebschner, PV Afonine, ML Baker, G Bunkóczi, VB Chen, TI Croll, ... Acta Crystallographica Section D: Structural Biology 75 (10), 861-877, 2019 | 2962 | 2019 |
| MolProbity: More and better reference data for improved all‐atom structure validation CJ Williams, JJ Headd, NW Moriarty, MG Prisant, LL Videau, LN Deis, ... Protein Science 27 (1), 293-315, 2018 | 2192 | 2018 |
| Amino acid preferences for specific locations at the ends of α helices JS Richardson, DC Richardson Science 240 (4859), 1648-1652, 1988 | 1724 | 1988 |
| Asparagine and glutamine: using hydrogen atom contacts in the choice of side-chain amide orientation JM Word, SC Lovell, JS Richardson, DC Richardson Journal of molecular biology 285 (4), 1735-1747, 1999 | 1519 | 1999 |
| The penultimate rotamer library SC Lovell, JM Word, JS Richardson, DC Richardson Proteins: Structure, Function, and Bioinformatics 40 (3), 389-408, 2000 | 1296 | 2000 |
| Determination and analysis of the 2 Ć structure of copper, zinc superoxide dismutase JA Tainer, ED Getzoff, KM Beem, JS Richardson, DC Richardson Journal of molecular biology 160 (2), 181-217, 1982 | 1277 | 1982 |
| Structure and mechanism of copper, zinc superoxide dismutase JA Tainer, ED Getzoff, JS Richardson, DC Richardson Nature 306 (5940), 284-287, 1983 | 1204 | 1983 |
| Principles and patterns of protein conformation JS Richardson, DC Richardson Prediction of protein structure and the principles of protein conformation, 1-98, 1989 | 1074* | 1989 |
| MolProbity: structure validation and all-atom contact analysis for nucleic acids and their complexes IW Davis, LW Murray, JS Richardson, DC Richardson Nucleic acids research 32 (suppl_2), W615-W619, 2004 | 1064 | 2004 |
| Natural β-sheet proteins use negative design to avoid edge-to-edge aggregation JS Richardson, DC Richardson Proceedings of the National Academy of Sciences 99 (5), 2754-2759, 2002 | 890 | 2002 |
| The Phenix software for automated determination of macromolecular structures PD Adams, PV Afonine, G Bunkóczi, VB Chen, N Echols, JJ Headd, ... Methods 55 (1), 94-106, 2011 | 781 | 2011 |
| Electrostatic recognition between superoxide and copper, zinc superoxide dismutase ED Getzoff, JA Tainer, PK Weiner, PA Kollman, JS Richardson, ... Nature 306, 287-290, 1983 | 679 | 1983 |
| Crystal structure of bovine Cu, Zn superoxide dismutase at 3 A resolution: chain tracing and metal ligands. J Richardson, KA Thomas, BH Rubin, DC Richardson Proceedings of the National Academy of Sciences 72 (4), 1349-1353, 1975 | 672 | 1975 |
| β-Sheet topology and the relatedness of proteins JS Richardson Nature 268 (5620), 495-500, 1977 | 662 | 1977 |
| Visualizing and quantifying molecular goodness-of-fit: small-probe contact dots with explicit hydrogen atoms JM Word, SC Lovell, TH LaBean, HC Taylor, ME Zalis, BK Presley, ... Journal of molecular biology 285 (4), 1711-1733, 1999 | 631 | 1999 |
David C. RichardsonProfessor of Biochemistry, Duke UniversityVerified email at kinemage.biochem.duke.edu
