| Let-7 family of microRNA is required for maturation and adult-like metabolism in stem cell-derived cardiomyocytes KT Kuppusamy, DC Jones, H Sperber, A Madan, KA Fischer, ... Proceedings of the National Academy of Sciences 112 (21), E2785-E2794, 2015 | 252 | 2015 |
| Compression of next-generation sequencing reads aided by highly efficient de novo assembly DC Jones, WL Ruzzo, X Peng, MG Katze Nucleic acids research 40 (22), e171-e171, 2012 | 216 | 2012 |
| Inhibition of β-catenin signaling respecifies anterior-like endothelium into beating human cardiomyocytes NJ Palpant, L Pabon, M Roberts, B Hadland, D Jones, C Jones, RT Moon, ... Development 142 (18), 3198-3209, 2015 | 71 | 2015 |
| Metabolic control over mTOR-dependent diapause-like state AM Hussein, Y Wang, J Mathieu, L Margaretha, C Song, DC Jones, ... Developmental cell 52 (2), 236-250. e7, 2020 | 64 | 2020 |
| A new approach to bias correction in RNA-Seq DC Jones, WL Ruzzo, X Peng, MG Katze Bioinformatics 28 (7), 921-928, 2012 | 44 | 2012 |
| Chromatin and transcriptional analysis of mesoderm progenitor cells identifies HOPX as a regulator of primitive hematopoiesis NJ Palpant, Y Wang, B Hadland, RJ Zaunbrecher, M Redd, D Jones, ... Cell reports 20 (7), 1597-1608, 2017 | 32 | 2017 |
| Isolator: accurate and stable analysis of isoform-level expression in RNA-Seq experiments DC Jones, KT Kuppusamy, NJ Palpant, X Peng, CE Murry, ... BioRxiv, 088765, 2016 | 6 | 2016 |
| Assessment and improvement of Indian‐origin rhesus macaque and M auritian‐origin cynomolgus macaque genome annotations using deep transcriptome sequencing data X Peng, L Pipes, H Xiong, RR Green, DC Jones, WL Ruzzo, GP Schroth, ... Journal of medical primatology 43 (5), 317-328, 2014 | 5 | 2014 |
| May 2014. Assessment and improvement of Indian-origin rhesus macaque and Mauritian-origin cynomolgus macaque genome annotations using deep transcriptome sequencing data X Peng, L Pipes, H Xiong, R Green, D Jones, W Ruzzo, G Schroth, ... J. Med. Primatol. http://dx. doi. org/10.1111/jmp 12125, 8 | 4 | 8 |
| Polee: RNA-Seq analysis using approximate likelihood DC Jones, WL Ruzzo NAR Genomics and Bioinformatics 3 (2), lqab046, 2021 | 1 | 2021 |
| Assessing and Adjusting for Technical Bias in High Throughput Sequencing Data D Jones | | 2022 |
| An information theoretic approach to detecting spatially varying genes DC Jones, P Danaher, Y Kim, JM Beechem, R Gottardo, EW Newell bioRxiv, 2022.11. 02.514777, 2022 | | 2022 |
| The analysis of RNA-Seq experiments using approximate likelihood DC Jones University of Washington, 2020 | | 2020 |
