Daniel C. Jones
Daniel C. Jones
Graduate Student, Computer Science and Engineering, University of Washington
Verified email at
Cited by
Cited by
Let-7 family of microRNA is required for maturation and adult-like metabolism in stem cell-derived cardiomyocytes
KT Kuppusamy, DC Jones, H Sperber, A Madan, KA Fischer, ...
Proceedings of the National Academy of Sciences 112 (21), E2785-E2794, 2015
Compression of next-generation sequencing reads aided by highly efficient de novo assembly
DC Jones, WL Ruzzo, X Peng, MG Katze
Nucleic acids research 40 (22), e171-e171, 2012
Inhibition of β-catenin signaling respecifies anterior-like endothelium into beating human cardiomyocytes
NJ Palpant, L Pabon, M Roberts, B Hadland, D Jones, C Jones, RT Moon, ...
Development 142 (18), 3198-3209, 2015
Metabolic control over mTOR-dependent diapause-like state
AM Hussein, Y Wang, J Mathieu, L Margaretha, C Song, DC Jones, ...
Developmental cell 52 (2), 236-250. e7, 2020
A new approach to bias correction in RNA-Seq
DC Jones, WL Ruzzo, X Peng, MG Katze
Bioinformatics 28 (7), 921-928, 2012
Chromatin and transcriptional analysis of mesoderm progenitor cells identifies HOPX as a regulator of primitive hematopoiesis
NJ Palpant, Y Wang, B Hadland, RJ Zaunbrecher, M Redd, D Jones, ...
Cell reports 20 (7), 1597-1608, 2017
Isolator: accurate and stable analysis of isoform-level expression in RNA-Seq experiments
DC Jones, KT Kuppusamy, NJ Palpant, X Peng, CE Murry, ...
BioRxiv, 088765, 2016
Assessment and improvement of Indian‐origin rhesus macaque and M auritian‐origin cynomolgus macaque genome annotations using deep transcriptome sequencing data
X Peng, L Pipes, H Xiong, RR Green, DC Jones, WL Ruzzo, GP Schroth, ...
Journal of medical primatology 43 (5), 317-328, 2014
May 2014. Assessment and improvement of Indian-origin rhesus macaque and Mauritian-origin cynomolgus macaque genome annotations using deep transcriptome sequencing data
X Peng, L Pipes, H Xiong, R Green, D Jones, W Ruzzo, G Schroth, ...
J. Med. Primatol. http://dx. doi. org/10.1111/jmp 12125, 8
Polee: RNA-Seq analysis using approximate likelihood
DC Jones, WL Ruzzo
NAR Genomics and Bioinformatics 3 (2), lqab046, 2021
Assessing and Adjusting for Technical Bias in High Throughput Sequencing Data
D Jones
An information theoretic approach to detecting spatially varying genes
DC Jones, P Danaher, Y Kim, JM Beechem, R Gottardo, EW Newell
bioRxiv, 2022.11. 02.514777, 2022
The analysis of RNA-Seq experiments using approximate likelihood
DC Jones
University of Washington, 2020
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