Horizontal gene transfer as a source of conflict and cooperation in prokaryotes RJ Hall, FJ Whelan, JO McInerney, Y Ou, MR Domingo Sananes Frontiers in Microbiology 11, 1569, 2020 | 68 | 2020 |
Epidermal keratinocytes initiate wound healing and pro-inflammatory immune responses following percutaneous schistosome infection CD Bourke, CT Prendergast, DE Sanin, TE Oulton, RJ Hall, AP Mountford International journal for parasitology 45 (4), 215-224, 2015 | 57 | 2015 |
The role of potentiating mutations in the evolution of pandemic Escherichia coli clones EA Cummins, AE Snaith, A McNally, RJ Hall European Journal of Clinical Microbiology & Infectious Diseases, 1-10, 2021 | 37 | 2021 |
Evidence for selection in the abundant accessory gene content of a prokaryote pangenome FJ Whelan, RJ Hall, JO McInerney Molecular biology and evolution 38 (9), 3697-3708, 2021 | 29 | 2021 |
A Tale of Three Species: Adaptation of Sodalis glossinidius to Tsetse Biology, Wigglesworthia Metabolism, and Host Diet RJ Hall, LA Flanagan, MJ Bottery, V Springthorpe, S Thorpe, AC Darby, ... MBio 10 (1), 10.1128/mbio. 02106-18, 2019 | 26 | 2019 |
Gene-gene relationships in an Escherichia coli accessory genome are linked to function and mobility RJ Hall, FJ Whelan, EA Cummins, C Connor, A McNally, JO McInerney Microbial Genomics 7 (9), 000650, 2021 | 18 | 2021 |
Prokaryote pangenomes are dynamic entities EA Cummins, RJ Hall, JO McInerney, A McNally Current Opinion in Microbiology 66, 73-78, 2022 | 16 | 2022 |
Distinct evolutionary trajectories in the Escherichia coli pangenome occur within sequence types EA Cummins, RJ Hall, C Connor, JO McInerney, A McNally Microbial Genomics 8 (11), 000903, 2022 | 14* | 2022 |
Simulating the evolutionary trajectories of metabolic pathways for insect symbionts in the genus Sodalis RJ Hall, S Thorpe, GH Thomas, AJ Wood Microbial Genomics 6 (7), e000378, 2020 | 10 | 2020 |
Growth in a biofilm promotes conjugation of a blaNDM-1-bearing plasmid between Klebsiella pneumoniae strains SJ Element, RA Moran, E Beattie, RJ Hall, W van Schaik, MMC Buckner mSphere 8 (4), 10.1128/msphere.00170-23, 2023 | 5 | 2023 |
Non-antibiotic pharmaceuticals are toxic against Escherichia coli with no evolution of cross-resistance to antibiotics RJ Hall, AE Snaith, SJ Element, RA Moran, H Smith, EA Cummins, ... npj Antimicrobials and Resistance 2 (1), 11, 2024 | 2* | 2024 |
The Sodalis system and flux balance analysis as a tool for investigating insect-microbe interactions and the evolution of symbioses R Hall, L Flanagan, M Bottery, V Springthorpe, S Thorpe, A Darby, J Wood, ... Access Microbiology 1 (1A), 176, 2019 | 2 | 2019 |
Phytoremediation as a Tool to Remove Drivers of Antimicrobial Resistance in the Aquatic Environment KF Chowdhury, RJ Hall, A McNally, LJ Carter Reviews of Environmental Contamination and Toxicology 261 (1), 16, 2023 | 1 | 2023 |
Multidrug resistance plasmids commonly reprogram the expression of metabolic genes in Escherichia coli RJ Hall, AE Snaith, MJN Thomas, MA Brockhurst, A McNally Msystems, e01193-23, 2024 | | 2024 |
Parallel loss of type VI secretion systems in two multi-drug-resistant Escherichia coli lineages EA Cummins, RA Moran, AE Snaith, RJ Hall, CH Connor, SJ Dunn, ... Microbial Genomics 9 (11), 001133, 2023 | | 2023 |
The Microbiome of the Tsetse: Metabolic adaptation and the evolution of symbiosis RJ Hall University of York, 2019 | | 2019 |