Miguel Ponce de Leon, PhD
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Transcriptome analysis of the bloodstream stage from the parasite Trypanosoma vivax
G Greif, M Ponce-de-Leon, G Lamolle, M Rodriguez, D Piñeyro, ...
BMC genomics 14 (1), 149, 2013
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ...
Molecular systems biology 17 (10), e10387, 2021
Solving gap metabolites and blocked reactions in genome-scale models: application to the metabolic network of Blattabacterium cuenoti
M Ponce-de-León, F Montero, J Peretó
BMC systems biology 7 (1), 1-15, 2013
Metabolic complementation in bacterial communities: necessary conditions and optimality
M Mori, M Ponce-de-León, J Peretó, F Montero
Frontiers in Microbiology 7, 1553, 2016
Simulating SARS-CoV-2 epidemics by region-specific variables and modeling contact tracing app containment
A Ferrari, E Santus, D Cirillo, M Ponce-de-Leon, N Marino, MT Ferretti, ...
NPJ digital medicine 4 (1), 9, 2021
Systems Biology at the giga-scale: large multi-scale models of complex, heterogeneous multicellular systems
A Montagud, M Ponce-de-Leon, A Valencia
Current Opinion in Systems Biology, 2021
A strategy to calculate the patterns of nutrient consumption by microorganisms applying a two-level optimisation principle to reconstructed metabolic networks
M Ponce-de-León, H Cancela, L Acerenza
Journal of biological physics 34 (1-2), 73-90, 2008
Nature lessons: The whitefly bacterial endosymbiont is a minimal amino acid factory with unusual energetics.
J Calle-Espinosa, M Ponce-de-Leon, D Santos-Garcia, FJ Silva, ...
Journal of Theoretical Biology 407, 303-317, 2016
Consistency Analysis of Genome-Scale Models of Bacterial Metabolism: A Metamodel Approach
M Ponce-de-Leon, J Calle-Espinosa, J Pereto, F Montero
PLOS One 10 (12), 2015
COVID-19 Flow-Maps an open geographic information system on COVID-19 and human mobility for Spain
M Ponce-de-Leon, J Del Valle, JM Fernandez, M Bernardo, D Cirillo, ...
Scientific Data 8 (1), 310, 2021
Interactive extreme-scale analytics: towards battling cancer
N Giatrakos, N Katzouris, A Deligiannakis, A Artikis, M Garofalakis, ...
IEEE Technology and Society Magazine 38 (2), 54-61, 2019
The Purine Bias of Coding Sequences is Determined by Physicochemical Constraints on Proteins
M Ponce de Leon, A Basilio de Miranda, F Alvarez-Valin, N Carels
Bioinformatics and Biology Insights 2014 (8), 93-108, 2014
BioFVM-X: An MPI+OpenMP 3-D Simulator for Biological Systems
G Saxena, M Ponce-de-Leon, A Montagud, D Vicente Dorca, A Valencia
Computational Methods in Systems Biology, 266-279, 2021
Simulating SARS-CoV-2 epidemics by region-specific variables and modeling contact tracing app containment. npj Digit
A Ferrari, E Santus, D Cirillo, M Ponce-de-Leon, N Marino, MT Ferretti, ...
Med 4 (9), 2021
Determinism and contingency shape metabolic complementation in an endosymbiotic consortium
M Ponce-de-Leon, D Tamarit, J Calle-Espinosa, M Mori, A Latorre, ...
Frontiers in microbiology 8, 2290, 2017
Parallel model exploration for tumor treatment simulations
C Akasiadis, M Ponce-de-Leon, A Montagud, E Michelioudakis, ...
Computational Intelligence, 2022
Optimizing dosage-specific treatments in a multi-scale model of a tumor growth
M Ponce-de-Leon, A Montagud, C Akasiadis, J Schreiber, T Ntiniakou, ...
Frontiers in Molecular Biosciences 9, 2022
Infore: Interactive cross-platform analytics for everyone
N Giatrakos, D Arnu, T Bitsakis, A Deligiannakis, M Garofalakis, ...
Proceedings of the 29th ACM International Conference on Information …, 2020
On the inconsistent treatment of gene-protein-reaction rules in context-specific metabolic models
M Ponce-de-León, I Apaolaza, A Valencia, FJ Planes
Bioinformatics, 593277, 2019
Evaluating the policy of closing bars and restaurants in Cataluña and its effects on mobility and COVID19 incidence
M Smith, M Ponce-de-Leon, A Valencia
Scientific Reports 12 (1), 9132, 2022
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Articles 1–20