| Recovering gene interactions from single-cell data using data diffusion D Van Dijk, R Sharma, J Nainys, K Yim, P Kathail, AJ Carr, C Burdziak, ... Cell 174 (3), 716-729. e27, 2018 | 1321 | 2018 |
| A gene–environment-induced epigenetic program initiates tumorigenesis D Alonso-Curbelo, YJ Ho, C Burdziak, JLV Maag, JP Morris IV, ... Nature 590 (7847), 642-648, 2021 | 149 | 2021 |
| Epigenetic plasticity cooperates with cell-cell interactions to direct pancreatic tumorigenesis C Burdziak, D Alonso-Curbelo, T Walle, J Reyes, FM Barriga, D Haviv, ... Science 380 (6645), eadd5327, 2023 | 41 | 2023 |
| Mapping the evolution of T cell states during response and resistance to adoptive cellular therapy P Bachireddy, E Azizi, C Burdziak, VN Nguyen, CS Ennis, K Maurer, ... Cell reports 37 (6), 2021 | 40 | 2021 |
| A nonparametric multi-view model for estimating cell type-specific gene regulatory networks C Burdziak, E Azizi, S Prabhakaran, D Pe'er arXiv preprint arXiv:1902.08138, 2019 | 14 | 2019 |
| scKINETICS: inference of regulatory velocity with single-cell transcriptomics data C Burdziak, CJ Zhao, D Haviv, D Alonso-Curbelo, SW Lowe, D Pe’er Bioinformatics 39 (Supplement_1), i394-i403, 2023 | 3 | 2023 |
| Wasserstein Wormhole: Scalable Optimal Transport Distance with Transformers D Haviv, RZ Kunes, T Dougherty, C Burdziak, T Nawy, A Gilbert, D Pe'er arXiv preprint arXiv:2404.09411, 2024 | | 2024 |
| A Novel Approach for Pancreas Transcriptomics Reveals the Cellular Landscape in Homeostasis and Acute Pancreatitis KJ Aney, WJ Jeong, AF Vallejo, C Burdziak, E Chen, A Wang, P Koak, ... Gastroenterology, 2024 | | 2024 |
| Erratum: Mapping the evolution of T cell states during response and resistance to adoptive cellular therapy (Cell Reports (2021) 37 (6),(S2211124721014716),(10.1016/j. celrep … P Bachireddy, E Azizi, C Burdziak, VN Nguyen, CS Ennis, K Maurer, ... Cell Reports 42 (8), 113011, 2023 | | 2023 |
| Quantifying and dissecting pancreatic cancer cell phenotypic plasticity using lineage tracing, single-cell multiomics and CRISPR perturbations reveals novel regulators of … A Mehta, L Bi, A Al'Khafaji, M Jankowiak, M Parikh, M Babadi, ... CANCER RESEARCH 82 (22), 67-67, 2022 | | 2022 |
| Inferring Mechanisms of Genetic, Epigenetic, and Environmental Cooperativity in Cancer Progression C Burdziak Weill Medical College of Cornell University, 2022 | | 2022 |
| Abstract LT008: Mapping the evolution of T cell states during response and resistance to adoptive cellular therapy P Bachireddy, E Azizi, C Burdziak, V Nguyen, C Ennis, ZN Choo, S Li, ... Cancer Research 81 (5_Supplement), LT008-LT008, 2021 | | 2021 |
| Cell Plasticity C Burdziak, D Alonso-Curbelo, T Walle, J Reyes, FM Barriga, D Haviv | | |
