| MinION nanopore sequencing identifies the position and structure of a bacterial antibiotic resistance island PM Ashton, S Nair, T Dallman, S Rubino, W Rabsch, S Mwaigwisya, ... Nature biotechnology 33 (3), 296-300, 2015 | 437 | 2015 |
| Rapid draft sequencing and real-time nanopore sequencing in a hospital outbreak of Salmonella J Quick, P Ashton, S Calus, C Chatt, S Gossain, J Hawker, S Nair, K Neal, ... Genome biology 16 (1), 1-14, 2015 | 279 | 2015 |
| Detection of the plasmid-mediated mcr-1 gene conferring colistin resistance in human and food isolates of Salmonella enterica and Escherichia coli in England … M Doumith, G Godbole, P Ashton, L Larkin, T Dallman, M Day, M Day, ... Journal of Antimicrobial Chemotherapy 71 (8), 2300-2305, 2016 | 248 | 2016 |
| Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study KS Baker, TJ Dallman, PM Ashton, M Day, G Hughes, PD Crook, ... The Lancet infectious diseases 15 (8), 913-921, 2015 | 193 | 2015 |
| Identification of Salmonella for public health surveillance using whole genome sequencing PM Ashton, S Nair, TM Peters, JA Bale, DG Powell, A Painset, R Tewolde, ... PeerJ 4, e1752, 2016 | 185 | 2016 |
| Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues CJ Meehan, GA Goig, TA Kohl, L Verboven, A Dippenaar, M Ezewudo, ... NATURE reviews microbiology 17 (9), 533-545, 2019 | 170 | 2019 |
| Whole-Genome Sequencing for National Surveillance of Shiga Toxin–Producing Escherichia coli O157 TJ Dallman, L Byrne, PM Ashton, LA Cowley, NT Perry, G Adak, ... Clinical Infectious Diseases 61 (3), 305-312, 2015 | 153 | 2015 |
| SnapperDB: a database solution for routine sequencing analysis of bacterial isolates T Dallman, P Ashton, U Schafer, A Jironkin, A Painset, S Shaaban, ... Bioinformatics 34 (17), 3028-3029, 2018 | 109 | 2018 |
| Prospective use of whole genome sequencing (WGS) detected a multi-country outbreak of Salmonella Enteritidis T Inns, PM Ashton, S Herrera-Leon, J Lighthill, S Foulkes, T Jombart, ... Epidemiology & Infection 145 (2), 289-298, 2017 | 96 | 2017 |
| Applying phylogenomics to understand the emergence of Shiga-toxin-producing Escherichia coli O157: H7 strains causing severe human disease in the UK TJ Dallman, PM Ashton, L Byrne, NT Perry, L Petrovska, R Ellis, L Allison, ... Microbial Genomics 1 (3), 2015 | 96 | 2015 |
| Prediction of phenotypic antimicrobial resistance profiles from whole genome sequences of non-typhoidal Salmonella enterica S Neuert, S Nair, MR Day, M Doumith, PM Ashton, KC Mellor, C Jenkins, ... Frontiers in microbiology 9, 592, 2018 | 90 | 2018 |
| MOST: a modified MLST typing tool based on short read sequencing R Tewolde, T Dallman, U Schaefer, CL Sheppard, P Ashton, B Pichon, ... PeerJ 4, e2308, 2016 | 88 | 2016 |
| Phylogenetic structure of European Salmonella Enteritidis outbreak correlates with national and international egg distribution network T Dallman, T Inns, T Jombart, P Ashton, N Loman, C Chatt, ... Microbial genomics 2 (8), 2016 | 70 | 2016 |
| Whole genome sequencing for the retrospective investigation of an outbreak of Salmonella Typhimurium DT 8 PM Ashton, T Peters, L Ameh, R McAleer, S Petrie, S Nair, I Muscat, ... PLoS currents 7, 2015 | 64 | 2015 |
| Public health surveillance in the UK revolutionises our understanding of the invasive Salmonella Typhimurium epidemic in Africa PM Ashton, SV Owen, L Kaindama, WPM Rowe, CR Lane, L Larkin, ... Genome medicine 9 (1), 1-13, 2017 | 56* | 2017 |
| WGS for surveillance of antimicrobial resistance: a pilot study to detect the prevalence and mechanism of resistance to azithromycin in a UK population of non-typhoidal Salmonella S Nair, P Ashton, M Doumith, S Connell, A Painset, S Mwaigwisya, ... Journal of Antimicrobial Chemotherapy 71 (12), 3400-3408, 2016 | 52 | 2016 |
| Whole genome sequencing for public health surveillance of Shiga toxin-producing Escherichia coli other than serogroup O157 MA Chattaway, TJ Dallman, A Gentle, MJ Wright, SE Long, PM Ashton, ... Frontiers in Microbiology 7, 258, 2016 | 50 | 2016 |
| Comparative genomics of Cryptococcus neoformans var. grubii associated with meningitis in HIV infected and uninfected patients in Vietnam JN Day, S Qihui, LT Thanh, PH Trieu, AD Van, NH Thu, TTH Chau, ... PLoS neglected tropical diseases 11 (6), e0005628, 2017 | 44 | 2017 |
| Whole genome sequencing demonstrates that geographic variation of Escherichia coli O157 genotypes dominates host association NJC Strachan, O Rotariu, B Lopes, M MacRae, S Fairley, C Laing, ... Scientific reports 5 (1), 1-10, 2015 | 44 | 2015 |
| Insight into Shiga toxin genes encoded by Escherichia coli O157 from whole genome sequencing PM Ashton, N Perry, R Ellis, L Petrovska, J Wain, KA Grant, C Jenkins, ... PeerJ 3, e739, 2015 | 44 | 2015 |
Tim DallmanUniversity of UtrechtDirección de correo verificada de uu.nl
