Follow
Ryan K Waples
Ryan K Waples
Postdoc, University of Washington
Verified email at bio.ku.dk
Title
Cited by
Cited by
Year
Genotyping by sequencing resolves shallow population structure to inform conservation of Chinook salmon (Oncorhynchus tshawytscha)
WA Larson, LW Seeb, MV Everett, RK Waples, WD Templin, JE Seeb
Evolutionary Applications 7 (3), 355-369, 2014
2342014
Estimating contemporary effective population size in non-model species using linkage disequilibrium across thousands of loci
RK Waples, WA Larson, RS Waples
Heredity 117 (4), 233-240, 2016
2172016
Paralogs are revealed by proportion of heterozygotes and deviations in read ratios in genotyping‐by‐sequencing data from natural populations
GJ McKinney, RK Waples, LW Seeb, JE Seeb
Molecular ecology resources 17 (4), 656-669, 2017
2152017
A resurrection study reveals rapid adaptive evolution within populations of an invasive plant
SE Sultan, T Horgan‐Kobelski, LM Nichols, CE Riggs, RK Waples
Evolutionary Applications 6 (2), 266-278, 2013
1312013
More grist for the mill? Species delimitation in the genomic era and its implications for conservation
DWG Stanton, P Frandsen, RK Waples, R Heller, IRM Russo, ...
Conservation Genetics 20, 101-113, 2019
902019
Effective number of breeders from sibship reconstruction: empirical evaluations using hatchery steelhead
MW Ackerman, BK Hand, RK Waples, G Luikart, RS Waples, CA Steele, ...
Evolutionary applications 10 (2), 146-160, 2017
802017
Allele frequency‐free inference of close familial relationships from genotypes or low‐depth sequencing data
RK Waples, A Albrechtsen, I Moltke
Molecular ecology 28 (1), 35-48, 2019
772019
Linkage mapping with paralogs exposes regions of residual tetrasomic inheritance in chum salmon (Oncorhynchus keta)
RK Waples, LW Seeb, JE Seeb
Molecular Ecology Resources 16 (1), 17-28, 2016
702016
An integrated linkage map reveals candidate genes underlying adaptive variation in Chinook salmon (Oncorhynchus tshawytscha)
GJ McKinney, LW Seeb, WA Larson, D Gomez‐Uchida, MT Limborg, ...
Molecular ecology resources 16 (3), 769-783, 2016
602016
Inbreeding effective population size and parentage analysis without parents
RS Waples, RK Waples
Molecular Ecology Resources 11, 162-171, 2011
572011
High genetic diversity and low differentiation reflect the ecological versatility of the African leopard
P Pečnerová, G Garcia-Erill, X Liu, C Nursyifa, RK Waples, CG Santander, ...
Current Biology 31 (9), 1862-1871. e5, 2021
442021
Temporally isolated lineages of pink salmon reveal unique signatures of selection on distinct pools of standing genetic variation
MT Limborg, RK Waples, JE Seeb, LW Seeb
Journal of Heredity 105 (6), 835-845, 2014
392014
Resolving allele dosage in duplicated loci using genotyping‐by‐sequencing data: A path forward for population genetic analysis
GJ McKinney, RK Waples, CE Pascal, LW Seeb, JE Seeb
Molecular Ecology Resources 18 (3), 570-579, 2018
352018
Parallel signatures of selection in temporally isolated lineages of pink salmon
LW Seeb, RK Waples, MT Limborg, KI Warheit, CE Pascal, JE Seeb
Molecular ecology 23 (10), 2473-2485, 2014
332014
Cohort-wide deep whole genome sequencing and the allelic architecture of complex traits
A Gilly, D Suveges, K Kuchenbaecker, M Pollard, L Southam, ...
Nature communications 9 (1), 4674, 2018
322018
The application of genomics to inform conservation of a functionally important reef fish (Scarus niger) in the Philippines
BL Stockwell, WA Larson, RK Waples, RA Abesamis, LW Seeb, ...
Conservation Genetics 17, 239-249, 2016
302016
Pseudoreplication in genomic‐scale data sets
RS Waples, RK Waples, EJ Ward
Molecular Ecology Resources 22 (2), 503-518, 2022
262022
Linkage mapping reveals strong chiasma interference in sockeye salmon: implications for interpreting genomic data
MT Limborg, RK Waples, FW Allendorf, JE Seeb
G3: Genes, Genomes, Genetics 5 (11), 2463-2473, 2015
262015
Fast, accurate local ancestry inference with FLARE
SR Browning, RK Waples, BL Browning
The American Journal of Human Genetics 110 (2), 326-335, 2023
152023
Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations
ME Lauterbur, MIA Cavassim, AL Gladstein, G Gower, NS Pope, ...
Elife 12, RP84874, 2023
132023
The system can't perform the operation now. Try again later.
Articles 1–20