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Zizhen Yao
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Adult mouse cortical cell taxonomy revealed by single cell transcriptomics
B Tasic, V Menon, TN Nguyen, TK Kim, T Jarsky, Z Yao, B Levi, LT Gray, ...
Nature neuroscience 19 (2), 335-346, 2016
14382016
Shared and distinct transcriptomic cell types across neocortical areas
B Tasic, Z Yao, LT Graybuck, KA Smith, TN Nguyen, D Bertagnolli, ...
Nature 563 (7729), 72-78, 2018
11462018
Conserved cell types with divergent features in human versus mouse cortex
RD Hodge, TE Bakken, JA Miller, KA Smith, ER Barkan, LT Graybuck, ...
Nature 573 (7772), 61-68, 2019
10292019
Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
AB Rosenberg, CM Roco, RA Muscat, A Kuchina, P Sample, Z Yao, ...
Science 360 (6385), 176-182, 2018
8852018
Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming
Y Cao, Z Yao, D Sarkar, M Lawrence, GJ Sanchez, MH Parker, ...
Developmental cell 18 (4), 662-674, 2010
4942010
Canonical genetic signatures of the adult human brain
M Hawrylycz, JA Miller, V Menon, D Feng, T Dolbeare, ...
Nature neuroscience 18 (12), 1832-1844, 2015
4722015
A suite of transgenic driver and reporter mouse lines with enhanced brain-cell-type targeting and functionality
TL Daigle, L Madisen, TA Hage, MT Valley, U Knoblich, RS Larsen, ...
Cell 174 (2), 465-480. e22, 2018
4692018
DUX4 activates germline genes, retroelements, and immune mediators: implications for facioscapulohumeral dystrophy
LN Geng, Z Yao, L Snider, AP Fong, JN Cech, JM Young, ...
Developmental cell 22 (1), 38-51, 2012
4202012
CMfinder—a covariance model based RNA motif finding algorithm
Z Yao, Z Weinberg, WL Ruzzo
Bioinformatics 22 (4), 445-452, 2006
4112006
Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline
Z Weinberg, JE Barrick, Z Yao, A Roth, JN Kim, J Gore, JX Wang, ER Lee, ...
Nucleic acids research 35 (14), 4809-4819, 2007
3832007
Single-nucleus and single-cell transcriptomes compared in matched cortical cell types
TE Bakken, RD Hodge, JA Miller, Z Yao, TN Nguyen, B Aevermann, ...
PloS one 13 (12), e0209648, 2018
3632018
A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation
Z Yao, CTJ van Velthoven, TN Nguyen, J Goldy, AE Sedeno-Cortes, ...
Cell 184 (12), 3222-3241. e26, 2021
3332021
Distinct descending motor cortex pathways and their roles in movement
MN Economo, S Viswanathan, B Tasic, E Bas, J Winnubst, V Menon, ...
Nature 563 (7729), 79-84, 2018
2952018
Fixed single-cell transcriptomic characterization of human radial glial diversity
ER Thomsen, JK Mich, Z Yao, RD Hodge, AM Doyle, S Jang, SI Shehata, ...
Nature methods 13 (1), 87-93, 2016
2272016
Comparative cellular analysis of motor cortex in human, marmoset and mouse
TE Bakken, NL Jorstad, Q Hu, BB Lake, W Tian, BE Kalmbach, M Crow, ...
Nature 598 (7879), 111-119, 2021
2092021
Integrated morphoelectric and transcriptomic classification of cortical GABAergic cells
NW Gouwens, SA Sorensen, F Baftizadeh, A Budzillo, BR Lee, T Jarsky, ...
Cell 183 (4), 935-953. e19, 2020
1982020
DUX4-induced gene expression is the major molecular signature in FSHD skeletal muscle
Z Yao, L Snider, J Balog, RJLF Lemmers, SM Van Der Maarel, R Tawil, ...
Human molecular genetics 23 (20), 5342-5352, 2014
1822014
A widespread riboswitch candidate that controls bacterial genes involved in molybdenum cofactor and tungsten cofactor metabolism
EE Regulski, RH Moy, Z Weinberg, JE Barrick, Z Yao, WL Ruzzo, ...
Molecular microbiology 68 (4), 918-932, 2008
1672008
Multimodal analysis of cell types in a hypothalamic node controlling social behavior
DW Kim, Z Yao, LT Graybuck, TK Kim, TN Nguyen, KA Smith, O Fong, L Yi, ...
Cell 179 (3), 713-728. e17, 2019
1582019
Differential genomic targeting of the transcription factor TAL1 in alternate haematopoietic lineages
CG Palii, C Perez‐Iratxeta, Z Yao, Y Cao, F Dai, J Davison, H Atkins, ...
The EMBO journal 30 (3), 494-509, 2011
1572011
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