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Structure and function of the global ocean microbiome
S Sunagawa, LP Coelho, S Chaffron, JR Kultima, K Labadie, G Salazar, ...
Science 348 (6237), 1261359, 2015
23712015
Eukaryotic plankton diversity in the sunlit ocean
C De Vargas, S Audic, N Henry, J Decelle, F Mahé, R Logares, E Lara, ...
Science 348 (6237), 1261605, 2015
17402015
The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
L Guillou, D Bachar, S Audic, D Bass, C Berney, L Bittner, C Boutte, ...
Nucleic acids research 41 (D1), D597-D604, 2012
15752012
Determinants of community structure in the global plankton interactome
G Lima-Mendez, K Faust, N Henry, J Decelle, S Colin, F Carcillo, ...
Science 348 (6237), 1262073, 2015
8692015
Swarm: robust and fast clustering method for amplicon-based studies
F Mahé, T Rognes, C Quince, C de Vargas, M Dunthorn
PeerJ 2, e593, 2014
8292014
Membrane lipids of symbiotic algae are diagnostic of sensitivity to thermal bleaching in corals
D Tchernov, MY Gorbunov, C De Vargas, S Narayan Yadav, AJ Milligan, ...
Proceedings of the National Academy of Sciences 101 (37), 13531-13535, 2004
7372004
Plankton networks driving carbon export in the oligotrophic ocean
L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi, S Roux, Y Darzi, ...
Nature 532 (7600), 465-470, 2016
7032016
Patterns and ecological drivers of ocean viral communities
JR Brum, JC Ignacio-Espinoza, S Roux, G Doulcier, SG Acinas, A Alberti, ...
Science 348 (6237), 1261498, 2015
6842015
Insights into global diatom distribution and diversity in the world’s ocean
S Malviya, E Scalco, S Audic, F Vincent, A Veluchamy, J Poulain, ...
Proceedings of the National Academy of Sciences 113 (11), E1516-E1525, 2016
6712016
Marine DNA viral macro-and microdiversity from pole to pole
AC Gregory, AA Zayed, N Conceição-Neto, B Temperton, B Bolduc, ...
Cell 177 (5), 1109-1123. e14, 2019
6072019
CBOL protist working group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms
J Pawlowski, S Audic, S Adl, D Bass, L Belbahri, C Berney, SS Bowser, ...
PLoS biology 10 (11), e1001419, 2012
5682012
Sensitivity of coccolithophores to carbonate chemistry and ocean acidification
L Beaufort, I Probert, T de Garidel-Thoron, EM Bendif, D Ruiz-Pino, ...
Nature 476 (7358), 80-83, 2011
5232011
Swarm v2: highly-scalable and high-resolution amplicon clustering
F Mahé, T Rognes, C Quince, C De Vargas, M Dunthorn
PeerJ 3, e1420, 2015
5202015
Pan genome of the phytoplankton Emiliania underpins its global distribution
BA Read, J Kegel, MJ Klute, A Kuo, SC Lefebvre, F Maumus, C Mayer, ...
Nature 499 (7457), 209-213, 2013
5182013
Patterns of rare and abundant marine microbial eukaryotes
R Logares, S Audic, D Bass, L Bittner, C Boutte, R Christen, JM Claverie, ...
Current Biology 24 (8), 813-821, 2014
4742014
A holistic approach to marine eco-systems biology
E Karsenti, SG Acinas, P Bork, C Bowler, C De Vargas, J Raes, M Sullivan, ...
PLoS biology 9 (10), e1001177, 2011
4712011
Molecular evidence of cryptic speciation in planktonic foraminifers and their relation to oceanic provinces
C De Vargas, R Norris, L Zaninetti, SW Gibb, J Pawlowski
Proceedings of the National Academy of Sciences 96 (6), 2864-2868, 1999
3961999
Marine protist diversity in E uropean coastal waters and sediments as revealed by high‐throughput sequencing
R Massana, A Gobet, S Audic, D Bass, L Bittner, C Boutte, A Chambouvet, ...
Environmental microbiology 17 (10), 4035-4049, 2015
3942015
Metagenomic 16S rDNA I llumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities
R Logares, S Sunagawa, G Salazar, FM Cornejo‐Castillo, I Ferrera, ...
Environmental microbiology 16 (9), 2659-2671, 2014
3742014
A global ocean atlas of eukaryotic genes
Q Carradec, E Pelletier, C Da Silva, A Alberti, Y Seeleuthner, ...
Nature communications 9 (1), 373, 2018
3252018
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