| Measurement of average decoding rates of the 61 sense codons in vivo J Gardin, R Yeasmin, A Yurovsky, Y Cai, S Skiena, B Futcher Elife 3, e03735, 2014 | 240 | 2014 |
| The role of ceramide synthases in the pathogenicity of Cryptococcus neoformans MA Munshi, JM Gardin, A Singh, C Luberto, R Rieger, T Bouklas, BC Fries, ... Cell reports 22 (6), 1392-1400, 2018 | 46 | 2018 |
| cAMP‐independent signal pathways stimulate hyphal morphogenesis in Candida albicans SM Parrino, H Si, S Naseem, K Groudan, J Gardin, JB Konopka Molecular microbiology 103 (5), 764-779, 2017 | 41 | 2017 |
| Regulation of Hyphal Growth and N-Acetylglucosamine Catabolism by Two Transcription Factors in Candida albicans S Naseem, K Min, D Spitzer, J Gardin, JB Konopka Genetics 206 (1), 299-314, 2017 | 37 | 2017 |
| Stride-level analysis of mouse open field behavior using deep-learning-based pose estimation K Sheppard, J Gardin, GS Sabnis, A Peer, M Darrell, S Deats, B Geuther, ... Cell reports 38 (2), 2022 | 34 | 2022 |
| Reply to Simmonds et al.: Codon pair and dinucleotide bias have not been functionally distinguished B Futcher, O Gorbatsevych, SH Shen, CB Stauft, Y Song, B Wang, ... Proceedings of the National Academy of Sciences 112 (28), E3635-E3636, 2015 | 26 | 2015 |
| Relative contributions of the structural and catalytic roles of Rrp6 in exosomal degradation of individual mRNAs K Mukherjee, J Gardin, B Futcher, J Leatherwood Rna 22 (9), 1311-1319, 2016 | 15 | 2016 |
| Prokaryotic coding regions have little if any specific depletion of Shine-Dalgarno motifs A Yurovsky, MR Amin, J Gardin, Y Chen, S Skiena, B Futcher PloS one 13 (8), e0202768, 2018 | 13 | 2018 |
| Gait-level analysis of mouse open field behavior using deep learning-based pose estimation K Sheppard, J Gardin, GS Sabnis, A Peer, M Darrell, S Deats, B Geuther, ... BioRxiv, 2020.12. 29.424780, 2020 | 11 | 2020 |
| The role of ceramide synthases in the pathogenicity of Cryptococcus neoformans. Cell Rep 22: 1392–1400 MA Munshi, JM Gardin, A Singh, C Luberto, R Rieger, T Bouklas, BC Fries, ... | 10 | 2018 |
| Optimal codon pair bias design N Donoghue, J Gardin, B Futcher, S Skiena 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2017 | 3 | 2017 |
| Tmod2 is a regulator of cocaine responses through control of striatal and cortical excitability, and drug-induced plasticity A Mitra, SP Deats, PE Dickson, J Zhu, J Gardin, BJ Nieman, ... Journal of Neuroscience, 2024 | 1 | 2024 |
| Gene recoding by synonymous mutations creates promiscuous intragenic transcription initiation in mycobacteria NK Hegelmeyer, LA Parkin, ML Previti, J Andrade, R Utama, RJ Sejour, ... Mbio 14 (5), e00841-23, 2023 | 1 | 2023 |
| A Statistical Detector for Ribosomal Frameshifts and Dual Encodings based on Ribosome Profiling A Yurovsky, J Gardin, B Futcher, S Skiena bioRxiv, 2022.06. 06.495024, 2022 | 1 | 2022 |
| Modified protein encoding sequences having increased rare hexamer content B Futcher, J Gardin, S Skiena, A Yurovsky, E Wimmer, S Mueller US Patent App. 15/773,685, 2019 | 1 | 2019 |
| Statistical methodology for ribosomal frameshift detection A Yurovsky, J Gardin, B Futcher, S Skiena Proceedings of the 13th ACM International Conference on Bioinformatics …, 2022 | | 2022 |
| Neurodevelopmental and Synaptic Modifications in Tropomodulin-2 Knockout Mice Results in Addiction-Relevant Phenotypes V Kumar, A Mitra, S Deats, R Zhu, J Gardin, P Dickson, B Nieman, ... NEUROPSYCHOPHARMACOLOGY 43, S359-S360, 2018 | | 2018 |
| The effect of Codon and Codon Pair Biases on Translation Speed and mRNA Stability in Saccharomyces cerevisiae J Gardin State University of New York at Stony Brook, 2016 | | 2016 |
| Improved position-dependent sequence motif characterization and automated transfer for gene prediction. J Gardin | | 2009 |
