Seguir
Anna Zhukova
Título
Citado por
Citado por
Año
Modeling sample variables with an Experimental Factor Ontology
J Malone, E Holloway, T Adamusiak, M Kapushesky, J Zheng, ...
Bioinformatics 26 (8), 1112-1118, 2010
5452010
Controlled vocabularies and semantics in systems biology
M Courtot, N Juty, C Knüpfer, D Waltemath, A Zhukova, A Dräger, ...
Molecular systems biology 7 (1), 543, 2011
3332011
SBML Level 3: an extensible format for the exchange and reuse of biological models
SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ...
Molecular systems biology 16 (8), e9110, 2020
2052020
A fast likelihood method to reconstruct and visualize ancestral scenarios
SA Ishikawa, A Zhukova, W Iwasaki, O Gascuel
Molecular biology and evolution 36 (9), 2069-2085, 2019
1732019
Toward community standards and software for whole-cell modeling
D Waltemath, JR Karr, FT Bergmann, V Chelliah, M Hucka, M Krantz, ...
IEEE Transactions on Biomedical Engineering 63 (10), 2007-2014, 2016
642016
Genome-Wide Transcriptional Start Site Mapping and sRNA Identification in the Pathogen Leptospira interrogans
A Zhukova, LG Fernandes, P Hugon, CJ Pappas, O Sismeiro, JY Coppée, ...
Frontiers in cellular and infection microbiology 7, 10, 2017
512017
Pantograph: A template-based method for genome-scale metabolic model reconstruction
N Loira, A Zhukova, DJ Sherman
Journal of bioinformatics and computational biology 13 (02), 1550006, 2015
382015
Origin, evolution and global spread of SARS-CoV-2
A Zhukova, L Blassel, F Lemoine, M Morel, J Voznica, O Gascuel
Comptes Rendus. Biologies 344 (1), 57-75, 2021
372021
Drug resistance mutations in HIV: new bioinformatics approaches and challenges
L Blassel, A Zhukova, CJ Villabona-Arenas, KE Atkins, S Hué, O Gascuel
Current opinion in virology 51, 56-64, 2021
342021
The seventh pandemic of cholera in Europe revisited by microbial genomics
M Oprea, E Njamkepo, D Cristea, A Zhukova, CG Clark, AN Kravetz, ...
Nature Communications 11 (1), 5347, 2020
232020
Deep learning from phylogenies to uncover the epidemiological dynamics of outbreaks
J Voznica, A Zhukova, V Boskova, E Saulnier, F Lemoine, ...
Nature Communications 13 (1), 3896, 2022
22*2022
BioSimulators: a central registry of simulation engines and services for recommending specific tools
B Shaikh, LP Smith, D Vasilescu, G Marupilla, M Wilson, E Agmon, ...
Nucleic acids research 50 (W1), W108-W114, 2022
162022
A new SARS-CoV-2 variant poorly detected by RT-PCR on nasopharyngeal samples, with high lethality
P Fillatre, MJ Dufour, S Behillil, R Vatan, P Reusse, A Gabellec, ...
Clinical Microbiology and Infection, 2021
14*2021
Phylogenetic analysis of HIV-1 shows frequent cross-country transmission and local population expansions
M Bennedbæk, A Zhukova, MHE Tang, J Bennet, P Munderi, ...
Virus evolution 7 (2), veab055, 2021
72021
The role of phylogenetics as a tool to predict the spread of resistance
A Zhukova, T Cutino-Moguel, O Gascuel, D Pillay
The Journal of Infectious Diseases 216 (suppl_9), S820-S823, 2017
72017
Genome-wide diversity of Zika virus: Exploring spatio-temporal dynamics to guide a new nomenclature proposal
SG Seabra, PJK Libin, K Theys, A Zhukova, BI Potter, ...
Virus evolution 8 (1), veac029, 2022
62022
Differing impacts of global and regional responses on SARS-CoV-2 transmission cluster dynamics
BR Magalis, A Ramirez-Mata, A Zhukova, C Mavian, S Marini, F Lemoine, ...
bioRxiv, 2020
62020
Knowledge-based generalization of metabolic models
A Zhukova, DJ Sherman
Journal of Computational Biology 21 (7), 534-547, 2014
52014
Cuban history of CRF19 recombinant subtype of HIV-1
A Zhukova, J Voznica, MD Felipe, TH To, L Pérez, Y Martínez, Y Pintos, ...
PLoS Pathog 17 (8), e1009786, 2021
42021
Efficiently analysing large viral data sets in computational phylogenomics
A Zhukova, O Gascuel, S Duchene, D Ayres, P Lemey, G Baele
This book has been completely handled by researchers. No publisher has been …, 2020
42020
El sistema no puede realizar la operación en estos momentos. Inténtalo de nuevo más tarde.
Artículos 1–20