| WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research DN Slenter, M Kutmon, K Hanspers, A Riutta, J Windsor, N Nunes, ... Nucleic acids research 46 (D1), D661-D667, 2018 | 932 | 2018 |
| WikiPathways: capturing the full diversity of pathway knowledge M Kutmon, A Riutta, N Nunes, K Hanspers, EL Willighagen, A Bohler, ... Nucleic acids research 44 (D1), D488-D494, 2016 | 499 | 2016 |
| Variation in the interaction between alleles of HvAPETALA2 and microRNA172 determines the density of grains on the barley inflorescence K Houston, SM McKim, J Comadran, N Bonar, I Druka, N Uzrek, E Cirillo, ... Proceedings of the National Academy of Sciences 110 (41), 16675-16680, 2013 | 151 | 2013 |
| Proposed guidelines to evaluate scientific validity and evidence for genotype-based dietary advice KA Grimaldi, B van Ommen, JM Ordovas, LD Parnell, JC Mathers, ... Genes & nutrition 12, 1-12, 2017 | 126 | 2017 |
| Rett syndrome–biological pathways leading from MECP2 to disorder phenotypes F Ehrhart, SLM Coort, E Cirillo, E Smeets, CT Evelo, LMG Curfs Orphanet journal of rare diseases 11, 1-13, 2016 | 101 | 2016 |
| A review of pathway-based analysis tools that visualize genetic variants E Cirillo, LD Parnell, CT Evelo Frontiers in genetics 8, 174, 2017 | 85 | 2017 |
| From SNPs to pathways: Biological interpretation of type 2 diabetes (T2DM) genome wide association study (GWAS) results E Cirillo, M Kutmon, M Gonzalez Hernandez, T Hooimeijer, ME Adriaens, ... PloS one 13 (4), e0193515, 2018 | 59 | 2018 |
| Integrated analysis of human transcriptome data for Rett syndrome finds a network of involved genes F Ehrhart, SL Coort, L Eijssen, E Cirillo, EE Smeets, NB Sangani, ... The World Journal of Biological Psychiatry, 2020 | 34 | 2020 |
| Visualizing the regulatory role of Angiopoietin-like protein 8 (ANGPTL8) in glucose and lipid metabolic pathways A Siddiqa, E Cirillo, SHK Tareen, A Ali, M Kutmon, LMT Eijssen, J Ahmad, ... Genomics 109 (5-6), 408-418, 2017 | 34 | 2017 |
| Synthetic Observational Health Data with GANs: from slow adoption to a boom in medical research and ultimately digital twins? J Georges-Filteau, E Cirillo arXiv preprint arXiv:2005.13510, 2020 | 15 | 2020 |
| New insights in Rett syndrome using pathway analysis for transcriptomics data F Ehrhart, SLM Coort, E Cirillo, E Smeets, CT Evelo, L Curfs Wiener Medizinische Wochenschrift (1946) 166 (11), 346, 2016 | 15 | 2016 |
| Sleep quality in children and adults with Rett syndrome Y Leven, F Wiegand, B Wilken Neuropediatrics 51 (03), 198-205, 2020 | 13 | 2020 |
| Biological pathways leading from ANGPTL8 to diabetes mellitus–a co-expression network based analysis A Siddiqa, E Cirillo, SHK Tareen, A Ali, M Kutmon, LMT Eijssen, J Ahmad, ... Frontiers in physiology 9, 1841, 2018 | 7 | 2018 |
| Generative Adversarial Networks Applied to Observational Health Data J Georges-Filteau, E Cirillo | 2 | 2020 |
| Network analysis of genome-wide association studies for chronic obstructive pulmonary disease in the context of biological pathways S Mount, E Cirillo, K Stewart, S Coort, CT Evelo, A Wesselius, MP Zeegers, ... American journal of respiratory and critical care medicine 200 (11), 1439-1441, 2019 | 2 | 2019 |
| Providing gene-to-variant and variant-to-gene database identifier mappings to use with BridgeDb mapping services. F Ehrhart, J Melius, E Cirillo, M Kutmon, EL Willighagen, SL Coort, ... F1000Research 7, ELIXIR-1390, 2018 | 2 | 2018 |
| Bridging clinical and genomic knowledge: An extension of the SPHN RDF schema for seamless integration and FAIRification of omics data E van der Horst, D Unni, F Kopmels, J Armida, V Touré, W Franke, ... Preprints, 2023 | 1 | 2023 |
| Embryonic stem cell pluripotency pathways K Hanspers, E Cirillo, D Slenter, M Martens, E Weitz, E Willighagen | | 2024 |
| Nod-like receptor (NLR) signaling pathway A Pico, M Summer-Kutmon, E Weitz, E Willighagen | | 2024 |
| Angiopoietin-like protein 8 regulatory pathway A Siddiqa, S Coort, E Cirillo, K Hanspers, E Willighagen, A Pico, ... | | 2024 |
