Maxim Kuleshov
Maxim Kuleshov
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Enrichr: a comprehensive gene set enrichment analysis web server 2016 update
MV Kuleshov, MR Jones, AD Rouillard, NF Fernandez, Q Duan, Z Wang, ...
Nucleic acids research 44 (W1), W90-W97, 2016
Gene Set Knowledge Discovery with Enrichr
Z Xie, A Bailey, MV Kuleshov, DJB Clarke, JE Evangelista, SL Jenkins, ...
Current Protocols 1 (3), e90, 2021
The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations
AB Keenan, SL Jenkins, KM Jagodnik, S Koplev, E He, D Torre, Z Wang, ...
Cell systems 6 (1), 13-24, 2018
eXpression2Kinases (X2K) Web: linking expression signatures to upstream cell signaling networks
DJB Clarke, MV Kuleshov, BM Schilder, D Torre, ME Duffy, AB Keenan, ...
Nucleic acids research 46 (W1), W171-W179, 2018
The COVID-19 drug and gene set library
MV Kuleshov, DJ Stein, DJB Clarke, E Kropiwnicki, KM Jagodnik, A Bartal, ...
Patterns 1 (6), 100090, 2020
Geneshot: search engine for ranking genes from arbitrary text queries
A Lachmann, BM Schilder, ML Wojciechowicz, D Torre, MV Kuleshov, ...
Nucleic acids research 47 (W1), W571-W577, 2019
modEnrichr: a suite of gene set enrichment analysis tools for model organisms
MV Kuleshov, JEL Diaz, ZN Flamholz, AB Keenan, A Lachmann, ...
Nucleic acids research 47 (W1), W183-W190, 2019
KEA3: improved kinase enrichment analysis via data integration
MV Kuleshov, Z Xie, ABK London, J Yang, JE Evangelista, A Lachmann, ...
Nucleic Acids Research 49 (W1), W304-W316, 2021
Chemokine signatures of pathogen-specific T cells I: effector T cells
J Eberlein, B Davenport, TT Nguyen, F Victorino, K Jhun, ...
The Journal of Immunology 205 (8), 2169-2187, 2020
Datasets2Tools, repository and search engine for bioinformatics datasets, tools and canned analyses
D Torre, P Krawczuk, KM Jagodnik, A Lachmann, Z Wang, L Wang, ...
Scientific data 5 (1), 1-10, 2018
Drugmonizome and Drugmonizome-ML: integration and abstraction of small molecule attributes for drug enrichment analysis and machine learning
E Kropiwnicki, JE Evangelista, DJ Stein, DJB Clarke, A Lachmann, ...
Database 2021, 2021
SigCom LINCS: data and metadata search engine for a million gene expression signatures
JE Evangelista, DJB Clarke, Z Xie, A Lachmann, M Jeon, K Chen, ...
Nucleic Acids Research, 2022
Chemokine Signatures of Pathogen-Specific T Cells II: Memory T Cells in Acute and Chronic Infection
B Davenport, J Eberlein, TT Nguyen, F Victorino, V van der Heide, ...
The Journal of Immunology 205 (8), 2188-2206, 2020
Gene and drug landing page aggregator
DJB Clarke, MV Kuleshov, Z Xie, JE Evangelista, MR Meyers, ...
Bioinformatics advances 2 (1), vbac013, 2022
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