Jörg Hakenberg

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Ulf LeserKnowledge Management in Bioinformatics, Humboldt-Universität zu BerlinDirección de correo verificada de informatik.hu-berlin.de
Graciela Gonzalez-HernandezDep. of Computational Biomedicine, Cedars-Sinai Medical CenterDirección de correo verificada de cshs.org
Luis TariUpToDate, Wolters Kluwer HealthDirección de correo verificada de asu.edu
Chitta BaralProfessor of Computer Science, Arizona State UniversityDirección de correo verificada de asu.edu
Michael SchroederProfessor in Bioinformatics, TU DresdenDirección de correo verificada de biotec.tu-dresden.de
Robert LeamanStaff Scientist, NCBI/NLM/NIHDirección de correo verificada de nih.gov
Philippe ThomasGerman Research Center for Artificial IntelligenceDirección de correo verificada de dfki.de
Illés SoltDirección de correo verificada de gravityrd.com
Domonkos TikkGravity R&D, a Taboola companyDirección de correo verificada de taboola.com
Jinbo XuProfessor, Toyota Technological Institute at ChicagoDirección de correo verificada de ttic.edu
Serafim BatzoglouSeerDirección de correo verificada de seer.bio
Laksshman SundaramGraduate Student in Computer Science, Stanford UniversityDirección de correo verificada de stanford.edu
Kyle Kai-How FarhPrincipal Investigator, Illumina AI LabDirección de correo verificada de illumina.com
Jack A. KosmickiRegeneron Genetics CenterDirección de correo verificada de fas.harvard.edu
Loic RoyerChan Zuckerberg BiohubDirección de correo verificada de czbiohub.org
Nguyen Ha VoGoogle ResearchDirección de correo verificada de google.com
Alexander A MorganKhosla VenturesDirección de correo verificada de stanford.edu
Lynette HirschmanThe MITRE CorporationDirección de correo verificada de mitre.org
Jeremy McRaeIllumina Inc.Dirección de correo verificada de illumina.com
Goran NenadicDepartment of Computer Science, University of ManchesterDirección de correo verificada de manchester.ac.uk

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Jörg Hakenberg

Illumina, Inc.

Dirección de correo verificada de illumina.com

Bioinformatics


Título Ordenar por citas Ordenar por año Ordenar por título	Citado por Citado por	Año
Genomic hallmarks and structural variation in metastatic prostate cancer DA Quigley, HX Dang, SG Zhao, P Lloyd, R Aggarwal, JJ Alumkal, A Foye, ... Cell 174 (3), 758-769. e9, 2018	632	2018
Overview of BioCreative II gene normalization AA Morgan, Z Lu, X Wang, AM Cohen, J Fluck, P Ruch, A Divoli, K Fundel, ... Genome biology 9, 1-19, 2008	405	2008
Predicting the clinical impact of human mutation with deep neural networks L Sundaram, H Gao, SR Padigepati, JF McRae, Y Li, JA Kosmicki, ... Nature genetics 50 (8), 1161-1170, 2018	363	2018
Analysis of 589,306 genomes identifies individuals resilient to severe Mendelian childhood diseases R Chen, L Shi, J Hakenberg, B Naughton, P Sklar, J Zhang, H Zhou, ... Nature biotechnology 34 (5), 531-538, 2016	352	2016
What makes a gene name? Named entity recognition in the biomedical literature U Leser, J Hakenberg Briefings in bioinformatics 6 (4), 357-369, 2005	244	2005
A comprehensive benchmark of kernel methods to extract protein–protein interactions from literature D Tikk, P Thomas, P Palaga, J Hakenberg, U Leser PLoS computational biology 6 (7), e1000837, 2010	223	2010
AliBaba: PubMed as a graph C Plake, T Schiemann, M Pankalla, J Hakenberg, U Leser Bioinformatics 22 (19), 2444-2445, 2006	199	2006
Acute Intermittent Porphyria: Predicted Pathogenicity of HMBS Variants Indicates Extremely Low Penetrance of the Autosomal Dominant Disease B Chen, C Solis‐Villa, J Hakenberg, W Qiao, RR Srinivasan, M Yasuda, ... Human mutation 37 (11), 1215-1222, 2016	179	2016
Inter-species normalization of gene mentions with GNAT J Hakenberg, C Plake, R Leaman, M Schroeder, G Gonzalez Bioinformatics 24 (16), i126-i132, 2008	156	2008
MAPPP: MHC class I antigenic peptide processing prediction. J Hakenberg, AK Nussbaum, H Schild, HG Rammensee, C Kuttler, ... Applied bioinformatics 2 (3), 155-158, 2003	130	2003
Introducing meta-services for biomedical information extraction F Leitner, M Krallinger, C Rodriguez-Penagos, J Hakenberg, C Plake, ... Genome biology 9, 1-11, 2008	96	2008
The GNAT library for local and remote gene mention normalization J Hakenberg, M Gerner, M Haeussler, I Solt, C Plake, M Schroeder, ... Bioinformatics 27 (19), 2769-2771, 2011	94	2011
Gene mention normalization and interaction extraction with context models and sentence motifs J Hakenberg, C Plake, L Royer, H Strobelt, U Leser, M Schroeder Genome biology 9, 1-16, 2008	92	2008
Disease-associated variants in different categories of disease located in distinct regulatory elements M Ma, Y Ru, LS Chuang, NY Hsu, LS Shi, J Hakenberg, WY Cheng, ... BMC genomics 16, 1-13, 2015	73	2015
Towards effective sentence simplification for automatic processing of biomedical text S Jonnalagadda, L Tari, J Hakenberg, C Baral, G Gonzalez arXiv preprint arXiv:1001.4277, 2010	73	2010
Efficient extraction of protein-protein interactions from full-text articles J Hakenberg, R Leaman, NH Vo, S Jonnalagadda, R Sullivan, C Miller, ... IEEE/ACM Transactions on Computational Biology and Bioinformatics 7 (3), 481-494, 2010	60	2010
LLL’05 challenge: Genic interaction extraction-identification of language patterns based on alignment and finite state automata J Hakenberg, C Plake, U Leser, H Kirsch, D Rebholz-Schuhmann Proceedings of the 4th Learning Language in Logic workshop (LLL05), 38-45, 2005	56	2005
Finding kinetic parameters using text mining J Hakenberg, S Schmeier, A Kowald, E Klipp, U Leser OMICS: A Journal of Integrative Biology 8 (2), 131-152, 2004	56	2004
Biomedical word sense disambiguation with ontologies and metadata: automation meets accuracy D Alexopoulou, B Andreopoulos, H Dietze, A Doms, F Gandon, ... BMC bioinformatics 10, 1-15, 2009	51	2009
Comparative analyses of population-scale phenomic data in electronic medical records reveal race-specific disease networks BS Glicksberg, L Li, MA Badgeley, K Shameer, R Kosoy, ND Beckmann, ... Bioinformatics 32 (12), i101-i110, 2016	50	2016

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