David Holmes
David Holmes
Director, Center for Bioinformatics and Genome Biology, Fundacion Ciencia y Vida
Verified email at cienciavida.cl
Title
Cited by
Cited by
Year
Observation of a new boson at a mass of 125 GeV with the CMS experiment at the LHC
S Chatrchyan, V Khachatryan, AM Sirunyan, A Tumasyan, W Adam, ...
Physics Letters B 716 (1), 30-61, 2012
160222012
A rapid boiling method for the preparation of bacterial plasmids
DS Holmes, M Quigley
Analytical biochemistry 114 (1), 193-197, 1981
36161981
Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications
J Valdés, I Pedroso, R Quatrini, RJ Dodson, H Tettelin, R Blake, JA Eisen, ...
BMC genomics 9 (1), 597, 2008
4512008
Preparation, molecular weight, base composition, and secondary structure of giant nuclear ribonucleic acid
DS Holmes, J Bonner
Biochemistry 12 (12), 2330-2338, 1973
3521973
Extending the models for iron and sulfur oxidation in the extreme Acidophile Acidithiobacillus ferrooxidans
R Quatrini, C Appia-Ayme, Y Denis, E Jedlicki, DS Holmes, V Bonnefoy
BMC genomics 10 (1), 394, 2009
2872009
Genomic insights into microbial iron oxidation and iron uptake strategies in extremely acidic environments
V Bonnefoy, DS Holmes
Environmental Microbiology 14 (7), 1597-1611, 2012
1712012
Biological cyanide destruction mediated by microorganisms
SK Dubey, DS Holmes
World Journal of Microbiology and Biotechnology 11 (3), 257-265, 1995
1581995
Insights into the iron and sulfur energetic metabolism of Acidithiobacillus ferrooxidans by microarray transcriptome profiling
R Quatrini, C Appia-Ayme, Y Denis, J Ratouchniak, F Veloso, J Valdes, ...
Hydrometallurgy 83 (1-4), 263-272, 2006
1392006
Sulfur metabolism in the extreme acidophile Acidithiobacillus caldus
S Mangold, J Valdés, D Holmes, M Dopson
Frontiers in microbiology 2, 17, 2011
1202011
Anaerobic sulfur metabolism coupled to dissimilatory iron reduction in the extremophile Acidithiobacillus ferrooxidans
S Mangold, Y Denis, M Esparza, DB Johnson, V Bonnefoy, M Dopson, ...
Applied and environmental microbiology 79 (7), 2172-2181, 2013
1182013
Selection of reference genes for quantitative real-time RT-PCR analysis in citrus
J Yan, F Yuan, G Long, L Qin, Z Deng
Molecular biology reports 39 (2), 1831-1838, 2012
1112012
Identification of a gene cluster for the formation of extracellular polysaccharide precursors in the chemolithoautotroph Acidithiobacillus ferrooxidans
M Barreto, E Jedlicki, DS Holmes
Applied and environmental microbiology 71 (6), 2902-2909, 2005
1082005
Apparent redundancy of electron transfer pathways via bc1 complexes and terminal oxidases in the extremophilic chemolithoautotrophic Acidithiobacillus ferrooxidans
G Brasseur, G Levicán, V Bonnefoy, D Holmes, E Jedlicki, ...
Biochimica et Biophysica Acta (BBA)-Bioenergetics 1656 (2-3), 114-126, 2004
962004
Differential expression of two bc1 complexes in the strict acidophilic chemolithoautotrophic bacterium Acidithiobacillus ferrooxidans suggests a model for their respective …
P Bruscella, C Appia-Ayme, G Levican, J Ratouchniak, E Jedlicki, ...
Microbiology 153 (1), 102-110, 2007
822007
Comparative genome analysis of Acidithiobacillus ferrooxidans, A. thiooxidans and A. caldus: insights into their metabolism and ecophysiology
J Valdés, I Pedroso, R Quatrini, DS Holmes
Hydrometallurgy 94 (1-4), 180-184, 2008
812008
Bioinformatic prediction and experimental verification of Fur-regulated genes in the extreme acidophile Acidithiobacillus ferrooxidans
R Quatrini, C Lefimil, FA Veloso, I Pedroso, DS Holmes, E Jedlicki
Nucleic acids research 35 (7), 2153-2166, 2007
812007
Two families of repeated DNA sequences in Thiobacillus ferrooxidans.
JR Yates, DS Holmes
Journal of bacteriology 169 (5), 1861-1870, 1987
811987
Second acyl homoserine lactone production system in the extreme acidophile Acidithiobacillus ferrooxidans
M Rivas, M Seeger, E Jedlicki, DS Holmes
Applied and environmental microbiology 73 (10), 3225-3231, 2007
792007
Acidiphilium organovorum sp. nov., an acidophilic heterotroph isolated from a Thiobacillus ferrooxidans culture
JH Lobos, TE Chisolm, LH Bopp, DS Holmes
International Journal of Systematic and Evolutionary Microbiology 36 (2 …, 1986
781986
Draft genome of the psychrotolerant acidophile Acidithiobacillus ferrivorans SS3
M Liljeqvist, J Valdes, DS Holmes, M Dopson
Journal of bacteriology 193 (16), 4304-4305, 2011
772011
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