Mark Akeson
Mark Akeson
Professor of Biomolecular Engineering, UC Santa Cruz
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Citado por
The Oxford Nanopore MinION: delivery of nanopore sequencing to the genomics community
M Jain, HE Olsen, B Paten, M Akeson
Genome biology 17, 1-11, 2016
Microsecond time-scale discrimination among polycytidylic acid, polyadenylic acid, and polyuridylic acid as homopolymers or as segments within single RNA molecules
M Akeson, D Branton, JJ Kasianowicz, E Brandin, DW Deamer
Biophysical journal 77 (6), 3227-3233, 1999
Three decades of nanopore sequencing
D Deamer, M Akeson, D Branton
Nature biotechnology 34 (5), 518-524, 2016
Improved data analysis for the MinION nanopore sequencer
M Jain, IT Fiddes, KH Miga, HE Olsen, B Paten, M Akeson
Nature methods 12 (4), 351-356, 2015
Automated forward and reverse ratcheting of DNA in a nanopore at 5-Å precision
GM Cherf, KR Lieberman, H Rashid, CE Lam, K Karplus, M Akeson
Nature biotechnology 30 (4), 344-348, 2012
Nanopores and nucleic acids: prospects for ultrarapid sequencing
DW Deamer, M Akeson
Trends in biotechnology 18 (4), 147-151, 2000
Rapid discrimination among individual DNA hairpin molecules at single-nucleotide resolution using an ion channel
W Vercoutere, S Winters-Hilt, H Olsen, D Deamer, D Haussler, M Akeson
Nature biotechnology 19 (3), 248-252, 2001
Nanopore native RNA sequencing of a human poly (A) transcriptome
RE Workman, AD Tang, PS Tang, M Jain, JR Tyson, R Razaghi, ...
Nature methods 16 (12), 1297-1305, 2019
Mapping DNA methylation with high-throughput nanopore sequencing
AC Rand, M Jain, JM Eizenga, A Musselman-Brown, HE Olsen, M Akeson, ...
Nature methods 14 (4), 411-413, 2017
Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
K Shafin, T Pesout, R Lorig-Roach, M Haukness, HE Olsen, C Bosworth, ...
Nature biotechnology 38 (9), 1044-1053, 2020
Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells
A Byrne, AE Beaudin, HE Olsen, M Jain, C Cole, T Palmer, RM DuBois, ...
Nature communications 8 (1), 16027, 2017
Unfoldase-mediated protein translocation through an α-hemolysin nanopore
J Nivala, DB Marks, M Akeson
Nature biotechnology 31 (3), 247-250, 2013
Single-molecule analysis of DNA-protein complexes using nanopores
B Hornblower, A Coombs, RD Whitaker, A Kolomeisky, SJ Picone, ...
Nature methods 4 (4), 315-317, 2007
Processive replication of single DNA molecules in a nanopore catalyzed by phi29 DNA polymerase
KR Lieberman, GM Cherf, MJ Doody, F Olasagasti, Y Kolodji, M Akeson
Journal of the American Chemical Society 132 (50), 17961-17972, 2010
Sequence-specific detection of individual DNA polymerase complexes in real time using a nanopore
S Benner, RJA Chen, NA Wilson, R Abu-Shumays, N Hurt, KR Lieberman, ...
Nature nanotechnology 2 (11), 718-724, 2007
Linear assembly of a human centromere on the Y chromosome
M Jain, HE Olsen, DJ Turner, D Stoddart, KV Bulazel, B Paten, D Haussler, ...
Nature biotechnology 36 (4), 321-323, 2018
Nanopore sensors for nucleic acid analysis
JJ Nakane, M Akeson, A Marziali
Journal of Physics: Condensed Matter 15 (32), R1365, 2003
Replication of individual DNA molecules under electronic control using a protein nanopore
F Olasagasti, KR Lieberman, S Benner, GM Cherf, JM Dahl, DW Deamer, ...
Nature nanotechnology 5 (11), 798-806, 2010
New DNA sequencing methods
A Marziali, M Akeson
Annual review of biomedical engineering 3 (1), 195-223, 2001
Discrimination among individual Watson–Crick base pairs at the termini of single DNA hairpin molecules
WA Vercoutere, S Winters‐Hilt, VS DeGuzman, D Deamer, SE Ridino, ...
Nucleic acids research 31 (4), 1311-1318, 2003
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