RIP-MD: a tool to study residue interaction networks in protein molecular dynamics S Contreras-Riquelme, JA Garate, T Perez-Acle, AJM Martin PeerJ 6, e5998, 2018 | 46 | 2018 |
Graphlet based metrics for the comparison of gene regulatory networks AJM Martin, C Dominguez, S Contreras-Riquelme, DS Holmes, ... PloS one 11 (10), e0163497, 2016 | 24 | 2016 |
Similarities between the binding sites of SB-206553 at serotonin type 2 and alpha7 acetylcholine nicotinic receptors: Rationale for its polypharmacological profile P Möller-Acuña, JS Contreras-Riquelme, C Rojas-Fuentes, ... PloS one 10 (8), e0134444, 2015 | 16 | 2015 |
LoTo: a graphlet based method for the comparison of local topology between gene regulatory networks AJ Martin, S Contreras-Riquelme, C Dominguez, T Perez-Acle PeerJ 5, e3052, 2017 | 11 | 2017 |
Transcriptional profiling of embryos lacking the lipoprotein receptor SR-B1 reveals a regulatory circuit governing a neurodevelopmental or metabolic decision during neural tube … N Santander, C Lizama, L Murgas, S Contreras, AJM Martin, P Molina, ... BMC genomics 19, 1-15, 2018 | 8 | 2018 |
Automated generation of context-specific gene regulatory networks with a weighted approach in Drosophila melanogaster L Murgas, S Contreras-Riquelme, JE Martínez-Hernandez, C Villaman, ... Interface Focus 11 (4), 20200076, 2021 | 4 | 2021 |
Homology-based reconstruction of regulatory networks for bacterial and archaeal genomes L Romero, S Contreras-Riquelme, M Lira, AJM Martin, E Perez-Rueda Frontiers in Microbiology 13, 923105, 2022 | 3 | 2022 |
Transcriptional and Histone Acetylation Changes Associated with CRE Elements Expose Key Factors Governing the Regulatory Circuit in the Early Stage of Huntington’s Disease Models S Arancibia-Opazo, JS Contreras-Riquelme, M Sanchez, ... International Journal of Molecular Sciences 24 (13), 2023 | 2 | 2023 |
1725P Metastasis-resident bacteria in advanced hormone receptor-positive breast cancer are related to primary tumor microbiota and show distinct composition C Araya, S Contreras-Riquelme, B Mino, FJ Perez, AJ Martin, ... Annals of Oncology 33, S1326, 2022 | | 2022 |
Automated generation of context-specific Gene Regulatory Networks with a weighted approach in D. melanogaster L Murgas, S Contreras-Riquelme, JE Martínez, C Villaman, R Santibánez, ... bioRxiv, 2020.08. 03.232959, 2020 | | 2020 |